RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CD82P27701 267 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 NBL1P41271 181 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 SLC35A1P78382 337 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 RPL18AQ02543 176 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 MEF2CQ06413 473 aaPredicted RBP1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 LAMTOR4Q0VGL1 99 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 CCL15Q16663 113 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF678Q5SXM1 525 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 PLCXD3Q63HM9 321 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 AMMECR1LQ6DCA0 310 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 OR8A1Q8NGG7 326 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 GLYATL2Q8WU03 294 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 RXFP2Q8WXD0 754 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 RBPMSQ93062 196 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 OR2M4Q96R27 311 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 OR2V2Q96R30 315 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 MRPL20Q9BYC9 149 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 STMN4Q9H169 189 aaPredicted RBP1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 ABCB9Q9NP78 766 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF492Q9P255 531 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 CFL2Q9Y281 166 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 ACOT9Q9Y305 439 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF780BQ9Y6R6 833 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 LTBP4Q8N2S1 1624 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 NSD2O96028 1365 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 COL5A1P20908 1838 aaPredicted RBP1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 ANKRD12Q6UB98 2062 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 TRAV8-6A0A0B4J262 113 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 A0A0B4J2E0 115 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 GMNCA6NCL1 334 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 IZUMO1RA6ND01 250 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 SUPT3HB4E1H0 165 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 H7C2Y5 167 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF701M0R085 212 aaPredicted RBP1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 CXorf1O96002 111 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 ANXA8P13928 327 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 HRES1P13985 223 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 PRPS1L1P21108 318 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 HTR2BP41595 481 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 GRB2P62993 217 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 ST3GAL4Q11206 333 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 HSP90AA4PQ58FG1 418 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 ANXA8L1Q5VT79 327 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 ULK3Q6PHR2 472 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 FAM131AQ6UXB0 335 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 FAM43BQ6ZT52 329 aaPredicted RBP1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 FAM122BQ7Z309 247 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 KATNAL2Q8IYT4 538 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 OFCC1Q8IZS5 231 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 DAW1Q8N136 415 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 KIF2BQ8N4N8 673 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 PIH1D2Q8WWB5 315 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 ISOC2Q96AB3 205 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 PEBP4Q96S96 227 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 ANP32EQ9BTT0 268 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 TSGA10Q9BZW7 698 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 RDH14Q9HBH5 336 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 RBM22Q9NW64 420 aaKnown RBP eCLIP1.45□□□□□ -2.187e-6■■■■□ 24.6
ECHDC1-213ENST00000474240 R4GN34 69 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 SPATA31E1Q6ZUB1 1445 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 PLEKHG2Q9H7P9 1386 aa1.45□□□□□ -2.18
ECHDC1-213ENST00000474240 NACADO15069 1562 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 ARPC4-TTLL3A0A0A6YYG9 625 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 A0A1W2PRF3 423 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 A0A1W2PRM7 423 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 SLC22A20A6NK97 555 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 LEUTXA8MZ59 168 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 E7EQL1 145 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 H3BN98 237 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 C15orf65H3BRN8 121 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 TCAPO15273 167 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 PSCAO43653 123 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 CATP04040 527 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 TGFBR2P37173 567 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 TUFMP49411 452 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 PSMD4P55036 377 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 KRTAP12-3P60328 96 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 LGALSLQ3ZCW2 172 aaPredicted RBP1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 FBXL19-AS1Q494R0 122 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 ATP6AP1LQ52LC2 224 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 ITPRIPQ8IWB1 547 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 CMTM8Q8IZV2 173 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 RPRMLQ8N4K4 120 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 ZFAND1Q8TCF1 268 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 GPX8Q8TED1 209 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 NAT6Q93015 286 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 OTUB2Q96DC9 234 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 RNF170Q96K19 258 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 DERL3Q96Q80 235 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 OR51B5Q9H339 312 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 WDR55Q9H6Y2 383 aaPredicted RBP1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 FBXO8Q9NRD0 319 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 RAB23Q9ULC3 237 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 SEC16AO15027 2179 aa1.44□□□□□ -2.18
ECHDC1-213ENST00000474240 SERTM2A0A1B0GWG4 89 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 K7ERS5 55 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 DFFAO00273 331 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 DEDDO75618 318 aa1.43□□□□□ -2.18
ECHDC1-213ENST00000474240 CTAG2O75638 210 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms