RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 OR56B1Q8NGI3 324 aa9.59□□□□□ -0.87
C9orf3-214ENST00000473778 OR5H2Q8NGV7 314 aa9.59□□□□□ -0.87
C9orf3-214ENST00000473778 NABP1Q96AH0 204 aa9.59□□□□□ -0.87
C9orf3-214ENST00000473778 RBM14Q96PK6 669 aaKnown RBP9.59□□□□□ -0.87
C9orf3-214ENST00000473778 PCED1AQ9H1Q7 454 aa9.59□□□□□ -0.87
C9orf3-214ENST00000473778 LIME1Q9H400 295 aa9.59□□□□□ -0.87
C9orf3-214ENST00000473778 RAB18Q9NP72 206 aa9.59□□□□□ -0.87
C9orf3-214ENST00000473778 PLA2G2EQ9NZK7 142 aa9.59□□□□□ -0.87
C9orf3-214ENST00000473778 DHRS7CA6NNS2 312 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 G3V3Y1 287 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 WRBO00258 174 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 NCKAP5O14513 1909 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 TPT1P13693 172 aaKnown RBP9.58□□□□□ -0.88
C9orf3-214ENST00000473778 RCC1P18754 421 aaPredicted RBP9.58□□□□□ -0.88
C9orf3-214ENST00000473778 BLVRBP30043 206 aaPredicted RBP9.58□□□□□ -0.88
C9orf3-214ENST00000473778 PTGER4P35408 488 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 POC1AQ8NBT0 407 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 OR5L2Q8NGL0 311 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 PIGTQ969N2 578 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 GNRHR2Q96P88 292 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 TSNAXQ99598 290 aaKnown RBP9.58□□□□□ -0.88
C9orf3-214ENST00000473778 PECRQ9BY49 303 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 SLC5A7Q9GZV3 580 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 SLC26A1Q9H2B4 701 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 ACKR4Q9NPB9 350 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 OR2S2Q9NQN1 319 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 OCIAD1Q9NX40 245 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 EHFQ9NZC4 300 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 MIOXQ9UGB7 285 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 SHANK1Q9Y566 2161 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 ZNF726A6NNF4 738 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 KNG1P01042 644 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 HOXB5P09067 269 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 PRF1P14222 555 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 SLC6A9P48067 706 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 CSNK2A1P68400 391 aaPredicted RBP9.58□□□□□ -0.88
C9orf3-214ENST00000473778 NAAAQ02083 359 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 AIMP2Q13155 320 aaKnown RBP9.58□□□□□ -0.88
C9orf3-214ENST00000473778 ZNF239Q16600 458 aaKnown RBP9.58□□□□□ -0.88
C9orf3-214ENST00000473778 SNAI3Q3KNW1 292 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 AVPI1Q5T686 147 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 PRSS54Q6PEW0 395 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 UQCC3Q6UW78 93 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 ZFP82Q8N141 532 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 CSNK2A3Q8NEV1 391 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 PAPOLGQ9BWT3 736 aaKnown RBP9.58□□□□□ -0.88
C9orf3-214ENST00000473778 PROK2Q9HC23 129 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 FAM96BQ9Y3D0 163 aa9.58□□□□□ -0.88
C9orf3-214ENST00000473778 IGHV2-70P01814 119 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 PNLIPP16233 465 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 CTSSP25774 331 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 C10orf91Q5T1B1 145 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 OR2A2Q6IF42 318 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 ZNF585AQ6P3V2 769 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 RBMS3Q6XE24 437 aaKnown RBP9.57□□□□□ -0.88
C9orf3-214ENST00000473778 Q7L0L9 218 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 FOXRED2Q8IWF2 684 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 DMBX1Q8NFW5 382 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 PGAM5Q96HS1 289 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 SHDQ96IW2 340 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 CCDC74BQ96LY2 380 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 AQP10Q96PS8 301 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 GSKIPQ9P0R6 139 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 RARRES3Q9UL19 164 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 CSTBP04080 98 aaKnown RBP9.57□□□□□ -0.88
C9orf3-214ENST00000473778 FCGR2AP12318 317 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 ACKR3P25106 362 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 NTF4P34130 210 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 ALDH3B1P43353 468 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 ID4P47928 161 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 NPBWR1P48145 328 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 GRB2P62993 217 aaKnown RBP9.57□□□□□ -0.88
C9orf3-214ENST00000473778 HGFACQ04756 655 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 ECH1Q13011 328 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 ACTBL2Q562R1 376 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 RPL7L1Q6DKI1 246 aaKnown RBP9.57□□□□□ -0.88
C9orf3-214ENST00000473778 STX12Q86Y82 276 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 RHBDD1Q8TEB9 315 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 RNF141Q8WVD5 230 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 EDARADDQ8WWZ3 215 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 FBXO17Q96EF6 278 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 URM1Q9BTM9 101 aaKnown RBP9.57□□□□□ -0.88
C9orf3-214ENST00000473778 DEFB126Q9BYW3 111 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 METTL8Q9H825 291 aaKnown RBP9.57□□□□□ -0.88
C9orf3-214ENST00000473778 ZNF160Q9HCG1 818 aa9.57□□□□□ -0.88
C9orf3-214ENST00000473778 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.57□□□□□ -0.88
C9orf3-214ENST00000473778 ZNF701Q9NV72 531 aaPredicted RBP9.57□□□□□ -0.88
C9orf3-214ENST00000473778 LOC102725191A0A1B0GVB3 256 aa9.56□□□□□ -0.88
C9orf3-214ENST00000473778 FIGNL2A6NMB9 653 aa9.56□□□□□ -0.88
C9orf3-214ENST00000473778 TOX3O15405 576 aaPredicted RBP9.56□□□□□ -0.88
C9orf3-214ENST00000473778 DHRS3O75911 302 aa9.56□□□□□ -0.88
C9orf3-214ENST00000473778 CCL3P10147 92 aa9.56□□□□□ -0.88
C9orf3-214ENST00000473778 OTX1P32242 354 aaPredicted RBP9.56□□□□□ -0.88
C9orf3-214ENST00000473778 OR3A2P47893 321 aa9.56□□□□□ -0.88
C9orf3-214ENST00000473778 CYCSP99999 105 aaKnown RBP9.56□□□□□ -0.88
C9orf3-214ENST00000473778 PCOLCEQ15113 449 aa9.56□□□□□ -0.88
C9orf3-214ENST00000473778 CDCP2Q5VXM1 449 aa9.56□□□□□ -0.88
C9orf3-214ENST00000473778 MRPL14Q6P1L8 145 aaKnown RBP9.56□□□□□ -0.88
C9orf3-214ENST00000473778 SLC16A14Q7RTX9 510 aa9.56□□□□□ -0.88
C9orf3-214ENST00000473778 GALNTL5Q7Z4T8 443 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms