RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	SPARC	P09486	303 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	PSG2	P11465	335 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	CCL3L1	P16619	93 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	NDUFB7	P17568	137 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	CX3CR1	P49238	355 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	CEBPD	P49716	269 aa	Predicted RBP	7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZNF121	P58317	390 aa	Predicted RBP	7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	BLCAP	P62952	87 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZNF273	Q14593	569 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	LRRC10	Q5BKY1	277 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	FAM57B	Q71RH2	274 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	NDUFA11	Q86Y39	141 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	CMTM4	Q8IZR5	234 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	OR51G2	Q8NGK0	314 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	OR4C15	Q8NGM1	316 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	OR4Q3	Q8NH05	313 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	OR2T6	Q8NHC8	308 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	OR5P3	Q8WZ94	311 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	C12orf43	Q96C57	262 aa	Known RBP	7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	DMRTB1	Q96MA1	342 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	CIB1	Q99828	191 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	C9orf16	Q9BUW7	83 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	GABARAPL1	Q9H0R8	117 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	VCX3B	Q9H321	246 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	RANBP3	Q9H6Z4	567 aa	Predicted RBP	7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	C14orf119	Q9NWQ9	140 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	USE1	Q9NZ43	259 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	DNAJC27	Q9NZQ0	273 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	KCNG2	Q9UJ96	466 aa		7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345	CAB39	Q9Y376	341 aa	Predicted RBP	7.75	□□□□□ -1.17
MCF2L-223	ENST00000473345		A0A1W2PRX2	142 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345		A6NDX4	124 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	ANKRD30BL	A7E2S9	258 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZNF850	A8MQ14	1090 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZNF593	O00488	134 aa	Predicted RBP	7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZNF823	P16415	610 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	COX7A1	P24310	79 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	RRM2	P31350	389 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	ENTPD1	P49961	510 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	DLX6	P56179	175 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	CAV3	P56539	151 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	PRDX4	Q13162	271 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	CRMP1	Q14194	572 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	FAM76B	Q5HYJ3	339 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	NCR3LG1	Q68D85	454 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZBTB49	Q6ZSB9	765 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	FAM185A	Q8N0U4	392 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	CD177	Q8N6Q3	437 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	PROKR2	Q8NFJ6	384 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	OR9Q2	Q8NGE9	314 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	EME1	Q96AY2	570 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZNF488	Q96MN9	340 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZNF184	Q99676	751 aa	Predicted RBP	7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	OCSTAMP	Q9BR26	566 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	PAPOLG	Q9BWT3	736 aa	Known RBP	7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	OSBPL10	Q9BXB5	764 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	MED20	Q9H944	212 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	BRD7	Q9NPI1	651 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	NLK	Q9UBE8	527 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	KLHDC2	Q9Y2U9	406 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	LYVE1	Q9Y5Y7	322 aa		7.74	□□□□□ -1.17
MCF2L-223	ENST00000473345	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345		A0A1W2PQ09	198 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	ARRDC5	A6NEK1	342 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	NKX6-3	A6NJ46	265 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	OR2AT4	A6NND4	320 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345		E9PQ18	207 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345		G3V2T6	193 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	GNGT2	O14610	69 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	XRCC2	O43543	280 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	XPNPEP2	O43895	674 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	ALPL	P05186	524 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	ANXA2	P07355	339 aa	Known RBP	7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	SPI1	P17947	270 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	HOXD3	P31249	432 aa	Predicted RBP	7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	GRK5	P34947	590 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	GABRA2	P47869	451 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	ALDH3A2	P51648	485 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	SMIM11A	P58511	58 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	CD83	Q01151	205 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	SPIB	Q01892	262 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	PPP1R8	Q12972	351 aa	Known RBP	7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	TSPAN31	Q12999	210 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	LRRC36	Q1X8D7	754 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	GFOD2	Q3B7J2	385 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	TMEM200B	Q69YZ2	307 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZNF770	Q6IQ21	691 aa	Predicted RBP	7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZNF782	Q6ZMW2	699 aa	Predicted RBP	7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	ZDHHC13	Q8IUH4	622 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	BATF2	Q8N1L9	274 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	CBR4	Q8N4T8	237 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	OR4M1	Q8NGD0	313 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	ABHD6	Q9BV23	337 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	NPFFR1	Q9GZQ6	430 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	DNTTIP1	Q9H147	329 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	REEP1	Q9H902	201 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	TCF19	Q9Y242	345 aa		7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	SF3B6	Q9Y3B4	125 aa	Known RBP	7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	FAM32A	Q9Y421	112 aa	Known RBP	7.73	□□□□□ -1.17
MCF2L-223	ENST00000473345	SAC3D1	A6NKF1	404 aa		7.72	□□□□□ -1.17

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