RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 TSGA10Q9BZW7 698 aa3.13□□□□□ -1.91
CCDC66-215ENST00000473322 NXF2Q9GZY0 626 aaKnown RBP3.13□□□□□ -1.91
CCDC66-215ENST00000473322 WDR54Q9H977 334 aa3.13□□□□□ -1.91
CCDC66-215ENST00000473322 RBFOX1Q9NWB1 397 aaKnown RBP3.13□□□□□ -1.91
CCDC66-215ENST00000473322 C1orf109Q9NX04 203 aa3.13□□□□□ -1.91
CCDC66-215ENST00000473322 PSMD13Q9UNM6 376 aa3.13□□□□□ -1.91
CCDC66-215ENST00000473322 SNX24Q9Y343 169 aa3.13□□□□□ -1.91
CCDC66-215ENST00000473322 TMEM14AQ9Y6G1 99 aa3.13□□□□□ -1.91
CCDC66-215ENST00000473322 SCN2AQ99250 2005 aa3.13□□□□□ -1.91
CCDC66-215ENST00000473322 GTF3C1Q12789 2109 aa3.13□□□□□ -1.91
CCDC66-215ENST00000473322 IGKV1-27A0A075B6S5 117 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 IGHV3-72A0A0B4J1Y9 119 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 ZNF705GA8MUZ8 300 aaPredicted RBP3.12□□□□□ -1.91
CCDC66-215ENST00000473322 UPK1AO00322 258 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 MANBAO00462 879 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 SHOX2O60902 331 aaPredicted RBP3.12□□□□□ -1.91
CCDC66-215ENST00000473322 NIPSNAP2O75323 286 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 TLX1NBP0CAT3 122 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 ZNF35P13682 527 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 ZNF19P17023 458 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 PSMB2P49721 201 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 XKP51811 444 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 PLTPP55058 493 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 UBE2KP61086 200 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 BAXQ07812 192 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 GUSBP11Q6P575 273 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 NTM-AS1Q6ZSK4 140 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 DRAM1Q8N682 238 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 OR8G5Q8NG78 346 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 OR1J4Q8NGS1 313 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 RNF138Q8WVD3 245 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.12□□□□□ -1.91
CCDC66-215ENST00000473322 CDS1Q92903 461 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 PPWD1Q96BP3 646 aaKnown RBP3.12□□□□□ -1.91
CCDC66-215ENST00000473322 NARS2Q96I59 477 aaKnown RBP3.12□□□□□ -1.91
CCDC66-215ENST00000473322 Q96MT0 163 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 BIRC8Q96P09 236 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 OR2M4Q96R27 311 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 OR4K3Q96R72 315 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 ZNF649Q9BS31 505 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 LHX5Q9H2C1 402 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 OR52D1Q9H346 318 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 SLC38A10Q9HBR0 1119 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 RBM22Q9NW64 420 aaKnown RBP eCLIP3.12□□□□□ -1.912e-6■□□□□ 11.1
CCDC66-215ENST00000473322 DNAJC27Q9NZQ0 273 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 ZNRD1Q9P1U0 126 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 SLC22A14Q9Y267 594 aa3.12□□□□□ -1.91
CCDC66-215ENST00000473322 PRG3Q9Y2Y8 225 aaPredicted RBP3.12□□□□□ -1.91
CCDC66-215ENST00000473322 SIGLEC1Q9BZZ2 1709 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 A0A096LNJ9 63 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 IGHV7-4-1A0A0J9YVY3 117 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 A0A1W2PNU3 283 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-215ENST00000473322 UPK2O00526 184 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 FABP7O15540 132 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 CHST10O43529 356 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 SYNGR1O43759 233 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 UGT2B11O75310 529 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 APCSP02743 223 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 HSPD1P10809 573 aaKnown RBP3.11□□□□□ -1.91
CCDC66-215ENST00000473322 ZNF3P17036 446 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 MDKP21741 143 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-215ENST00000473322 NDPQ00604 133 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 LAMTOR4Q0VGL1 99 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 RBMY1FQ15415 496 aaKnown RBP3.11□□□□□ -1.91
CCDC66-215ENST00000473322 TRAM1Q15629 374 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 CEACAM21Q3KPI0 293 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 LINC00303Q3SY05 128 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 TIMM23BQ5SRD1 257 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 OPN5Q6U736 354 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 UGT2A3Q6UWM9 527 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 MDP1Q86V88 176 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 ATPAF2Q8N5M1 289 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 OR4M1Q8NGD0 313 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 DDI1Q8WTU0 396 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 OR5P2Q8WZ92 322 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 ZNF799Q96GE5 643 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 ZNF414Q96IQ9 312 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 ZNF514Q96K75 400 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-215ENST00000473322 DSN1Q9H410 356 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 EXOSC4Q9NPD3 245 aaKnown RBP3.11□□□□□ -1.91
CCDC66-215ENST00000473322 ANAPC11Q9NYG5 84 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 PRO0628Q9UI54 55 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 RAB22AQ9UL26 194 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 PSG11Q9UQ72 335 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 ORC6Q9Y5N6 252 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 ABCB11O95342 1321 aa3.11□□□□□ -1.91
CCDC66-215ENST00000473322 A0A0A6YYH2 397 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 CCL15-CCL14A0A0B4J2E2 113 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 KIR2DS1A0A191URI9 304 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 TMEM223A0PJW6 202 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 A6NJ64 397 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 M0QXV9 152 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 SLC31A1O15431 190 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 NDUFS5O43920 106 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 EIF1BO60739 113 aaKnown RBP3.1□□□□□ -1.91
CCDC66-215ENST00000473322 CD74P04233 296 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 MRPL3P09001 348 aaKnown RBP3.1□□□□□ -1.91
CCDC66-215ENST00000473322 HLA-GP17693 338 aa3.1□□□□□ -1.91
CCDC66-215ENST00000473322 EIF1P41567 113 aaKnown RBP3.1□□□□□ -1.91
CCDC66-215ENST00000473322 RPS10P46783 165 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms