RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TBC1D26Q86UD7 250 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RAB37Q96AX2 223 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CABLES2Q9BTV7 478 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 WDR13Q9H1Z4 485 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 KCNAB3O43448 404 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ADRA2CP18825 462 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PMCHP20382 165 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ARNTP27540 789 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SDHAP31040 664 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR5D13Q8NGL4 314 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TEAD3Q99594 435 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TXLNGYQ9BZA5 131 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OOEPA6NGQ2 149 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MRPS14O60783 128 aaKnown RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 POU3F3P20264 500 aaPredicted RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CLDN10P78369 228 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZNF528Q3MIS6 628 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ADPRHL1Q8NDY3 354 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PRSS3P2Q8NHM4 247 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 DDOQ99489 341 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TCRBV3S1A0A5B6 114 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CDX4O14627 284 aaPredicted RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RAB1BQ9H0U4 201 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 C11orf54Q9H0W9 315 aaPredicted RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RNF167Q9H6Y7 350 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NBASA2RRP1 2371 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ORM2P19652 201 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMEM267Q0VDI3 215 aaPredicted RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TPBGQ13641 420 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR2L13Q8N349 312 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 LILRB4Q8NHJ6 448 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SEBOXQ9HB31 216 aaPredicted RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 EIF4E2O60573 245 aaKnown RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CPN1P15169 458 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMEM88Q6PEY1 159 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZCCHC14Q8WYQ9 949 aaKnown RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MS4A6EQ96DS6 147 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NTN4Q9HB63 628 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR2T8A6NH00 312 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TNFRSF1AP19438 455 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MTNR1BP49286 362 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 GUCA2BQ16661 112 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 C20orf196Q8IYI0 205 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 EDARADDQ8WWZ3 215 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OXGR1Q96P68 337 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 IL36GQ9NZH8 169 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TGOLN2O43493 480 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CHRM2P08172 466 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 COL19A1Q14993 1142 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 GUSBP11Q6P575 273 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 Q6ZS52 159 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SLC25A32Q9H2D1 315 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 IGHV3-43A0A0B4J1X8 118 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 IGHV3-43DP0DP04 118 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CA6P23280 308 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PDZK1IP1Q13113 114 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FGF14Q92915 247 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SPACA9Q96E40 222 aaPredicted RBP11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ADGRG7Q96K78 797 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 C20orf141Q9NUB4 165 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RBFOX1Q9NWB1 397 aaKnown RBP11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PSORS1C1Q9UIG5 152 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 EXOGQ9Y2C4 368 aaKnown RBP11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 LAMA4Q16363 1823 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NAAAQ02083 359 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PRSS8Q16651 343 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SYT14P1Q58G82 188 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FAAP24Q9BTP7 215 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NIT2Q9NQR4 276 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 COA4Q9NYJ1 87 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CBY1Q9Y3M2 126 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RHBDL1O75783 438 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 VAMP5O95183 116 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SLC25A5P05141 298 aaKnown RBP11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SHBQ15464 509 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 UBALD2Q8IYN6 164 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR1L3Q8NH93 324 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR1L1Q8NH94 360 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MARCH1Q8TCQ1 289 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ORAI1Q96D31 301 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MOGAT1Q96PD6 335 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TAAR6Q96RI8 345 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MYO5AQ9Y4I1 1855 aaKnown RBP11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 AGFG2O95081 481 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 G6PCP35575 357 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CMPK2Q5EBM0 449 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SLC35D3Q5M8T2 416 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR4F17Q8NGA8 305 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PDLIM5Q96HC4 596 aaKnown RBP11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RNF2Q99496 336 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PBOV1Q9GZY1 135 aa11.93□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FUCA1P04066 466 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 HOXC4P09017 264 aaPredicted RBP11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 HKR1P10072 659 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FKBP2P26885 142 aaKnown RBP11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ETV6P41212 452 aa11.92□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 EMDP50402 254 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms