RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 TMEM183BQ1AE95 376 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ARHGAP11BQ3KRB8 267 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 DUSP28Q4G0W2 176 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 C1orf53Q5VUE5 145 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 PLPP4Q5VZY2 271 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TMEM225Q6GV28 225 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ZNF793Q6ZN11 406 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 LYG1Q8N1E2 194 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ZNF709Q8N972 641 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OR5T1Q8NG75 326 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 VN1R17PQ8TDU5 208 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 CORO2AQ92828 525 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TMEM230Q96A57 120 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ZNF689Q96CS4 500 aaPredicted RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 PGAM5Q96HS1 289 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 RCC1LQ96I51 464 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 ZNF552Q9H707 407 aaPredicted RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 PATZ1Q9HBE1 687 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 MKKSQ9NPJ1 570 aaPredicted RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 CUTCQ9NTM9 273 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 FBXO34Q9NWN3 711 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ABT1Q9ULW3 272 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 CLEC4EQ9ULY5 219 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SLC7A11Q9UPY5 501 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 C14orf166Q9Y224 244 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 INSL5Q9Y5Q6 135 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 DENND4CQ5VZ89 1909 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 LTBP3Q9NS15 1303 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 TRBV5-7A0A0A0MS05 114 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 KIR2DL5BA0A0G2JN68 375 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 KIR2DL5BA0A0G2JPC4 375 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 GRXCR1A8MXD5 290 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 C17orf105B2RV13 164 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 E5RGE8 158 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 SCDO00767 359 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 TBX19O60806 448 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 DEDDO75618 318 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 DBIP07108 87 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 CD55P08174 381 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 MLF1P58340 268 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 SELENOTP62341 195 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 GNB2P62879 340 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 RPL19P84098 196 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 ZNF92Q03936 586 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 GGTLC2Q14390 218 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 MLC1Q15049 377 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 VAMP3Q15836 100 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 TDRG1Q3Y452 100 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 TMEM176BQ3YBM2 270 aaPredicted RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 LDLRAD2Q5SZI1 272 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 DPPA3Q6W0C5 159 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 SLC25A26Q70HW3 274 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 ERASQ7Z444 233 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 HOGA1Q86XE5 327 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 MCEMP1Q8IX19 187 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 GCNT2Q8N0V5 402 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 KIR2DL5AQ8N109 375 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 OR5L2Q8NGL0 311 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 OR2I1PQ8NGU4 316 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 OR2AJ1Q8NGZ0 328 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 OR14L1PQ8NHC6 308 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 CXorf40AQ8TE69 158 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 AQP3Q92482 292 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 MCHR2Q969V1 340 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 WDR34Q96EX3 536 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 C4orf45Q96LM5 186 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 SDF2Q99470 211 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 SMDT1Q9H4I9 107 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 GSX1Q9H4S2 264 aaPredicted RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 SRD5A3Q9H8P0 318 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 WDR76Q9H967 626 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 C1orf123Q9NWV4 160 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 EHFQ9NZC4 300 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 SERTAD3Q9UJW9 196 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 GPR132Q9UNW8 380 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 NSG2Q9Y328 171 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 RTTNQ86VV8 2226 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 CCDC163A0A0D9SF12 145 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 MBLAC1A4D2B0 266 aaPredicted RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 AQP7P3A6NL99 342 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 TRDCB7Z8K6 153 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 F6UZH7 168 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 NGFRP08138 427 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 CHRM2P08172 466 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 LYL1P12980 280 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 FOLR1P15328 257 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 CSRP1P21291 193 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 LMO1P25800 156 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 ACAA2P42765 397 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 CDKN2AP42771 156 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 CDC34P49427 236 aaPredicted RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 EMP2P54851 167 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 CTXN1P60606 82 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 POLR2LP62875 67 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 SUPT4H1P63272 117 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 CSNK2A1P68400 391 aaPredicted RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 MRPS6P82932 125 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 CDK3Q00526 305 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 GPR18Q14330 331 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 ZNF260Q3ZCT1 412 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms