RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 COPZ1P61923 177 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 RPP38P78345 283 aaKnown RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 PRKCDQ05655 676 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 RPL18Q07020 188 aaKnown RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ST3GAL3Q11203 375 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SELENBP1Q13228 472 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 DGCR6Q14129 220 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 MICAQ29983 383 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SLC36A3Q495N2 470 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 LRRC37A5PQ49AS3 106 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ACSF3Q4G176 576 aaPredicted RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 HBMQ6B0K9 141 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 LAIR2Q6ISS4 152 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ACSM5Q6NUN0 579 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 C3orf33Q6P1S2 294 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FAHD1Q6P587 224 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ULK3Q6PHR2 472 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SHQ1Q6PI26 577 aaKnown RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 TTC33Q6PID6 262 aaPredicted RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SMARCD3Q6STE5 483 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 NHLRC1Q6VVB1 395 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 TMEM182Q6ZP80 229 aaPredicted RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 TMUB2Q71RG4 321 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 DOLPP1Q86YN1 238 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 MISPQ8IVT2 679 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 TUSC5Q8IXB3 177 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FGFRL1Q8N441 504 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ZIC4Q8N9L1 334 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SYT14Q8NB59 555 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 CYB561A3Q8NBI2 242 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 OR51L1Q8NGJ5 315 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 OR9Q1Q8NGQ5 310 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 OR2V1Q8NHB1 315 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 OR5K1Q8NHB7 308 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SETD6Q8TBK2 473 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FANK1Q8TC84 345 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 MAGEE2Q8TD90 523 aaPredicted RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 GIPC3Q8TF64 312 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ACOT11Q8WXI4 607 aaPredicted RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ST8SIA1Q92185 356 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 STMN2Q93045 179 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ST6GALNAC6Q969X2 333 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 BPIFA2Q96DR5 249 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SGTBQ96EQ0 304 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 RADILQ96JH8 1075 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 Q96M85 177 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 TSPAN32Q96QS1 320 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 RBM24Q9BX46 236 aaKnown RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 OSBPL10Q9BXB5 764 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 TTTY10Q9BZA0 68 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 UCK2Q9BZX2 261 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 OPN3Q9H1Y3 402 aaPredicted RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 OR52D1Q9H346 318 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FNDC4Q9H6D8 234 aaPredicted RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 PTGES2Q9H7Z7 377 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 MOB1AQ9H8S9 216 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 CALHM2Q9HA72 323 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 RNPEPL1Q9HAU8 725 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 CACYBPQ9HB71 228 aaKnown RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SDHAF3Q9NRP4 125 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 CLCF1Q9UBD9 225 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 B4GALT7Q9UBV7 327 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 MED31Q9Y3C7 131 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FAM32AQ9Y421 112 aaKnown RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 IER3IP1Q9Y5U9 82 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FAM208BQ5VWN6 2430 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 LRBAP50851 2863 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 USP9XQ93008 2570 aaPredicted RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 SPTBN1Q01082 2364 aaKnown RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 TRAV36DV7A0A075B6V5 113 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 A0A087WZY1 265 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 A0A0B4J203 849 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 NKX2-6A6NCS4 301 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 C5orf52A6NGY3 159 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 SLC22A20A6NK97 555 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 A8MU10 97 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 C19orf84I3L1E1 186 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 PLPP3O14495 311 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 MAGEB4O15481 346 aaPredicted RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 RNF13O43567 381 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 TRAF3IP2O43734 574 aaPredicted RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 PRKYO43930 277 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 STAMBPO95630 424 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 IGKV3-15P01624 115 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 MELTFP08582 738 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 HIST1H1CP16403 213 aaKnown RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 ABOP16442 354 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 AZU1P20160 251 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 IGFBP5P24593 272 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 PYCR1P32322 319 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 CD79BP40259 229 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 HCCSP53701 268 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 BIDP55957 195 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 CTBP2P56545 445 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 CARD18P57730 90 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 RPS4XP62701 263 aaKnown RBP3.14□□□□□ -1.91
COL9A1-206ENST00000470652 H3F3AP84243 136 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 SLC34A1Q06495 639 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 PMS2P3Q13401 168 aa3.14□□□□□ -1.91
COL9A1-206ENST00000470652 SGCBQ16585 318 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms