RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 OR51T1Q8NGJ9 327 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 EMG1Q92979 244 aaKnown RBP8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 VSTM2LQ96N03 204 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 ZNF2Q9BSG1 426 aaPredicted RBP8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 GOLT1BQ9Y3E0 138 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 FAM221AA4D161 298 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 RPL36A-HNRNPH2H7BZ11 118 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 SCDO00767 359 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 AMBPP02760 352 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 CISD3P0C7P0 127 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 GLIPR1P48060 266 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 FXYD4P59646 89 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 RPL23AP62750 156 aaKnown RBP8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 ROM1Q03395 351 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 BATFQ16520 125 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 AGBL4Q5VU57 503 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 CA13Q8N1Q1 262 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 METTL27Q8N6F8 245 aaPredicted RBP8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 NECAP1Q8NC96 275 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 OR5D14Q8NGL3 314 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 OR6X1Q8NH79 312 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 C16orf52Q8NHV5 167 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 FAM3CQ92520 227 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 CTHRC1Q96CG8 243 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 WFIKKN1Q96NZ8 548 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 G6PC2Q9NQR9 355 aa8.42□□□□□ -1.06
NHLRC3-203ENST00000470258 CCDC187A0A096LP49 1063 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 MARCH11A6NNE9 402 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SCGNO76038 276 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 CEACAM5P06731 702 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SRP19P09132 144 aaKnown RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SLC35E2P0CK97 266 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 MMP9P14780 707 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 FOSL2P15408 326 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 HSD11B1P28845 292 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 RPL29P47914 159 aaKnown RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 MNX1P50219 401 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 TMEM50BP56557 158 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 KLHL24Q6TFL4 600 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 FBXW12Q6X9E4 464 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 MRPL41Q8IXM3 137 aaKnown RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 CRIPAKQ8N1N5 446 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 CCL4L1Q8NHW4 92 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SCARF2Q96GP6 870 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 FAM71F1Q96KD3 344 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 ZFYVE21Q9BQ24 234 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 GINS3Q9BRX5 216 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 CABLES2Q9BTV7 478 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 VN1R1Q9GZP7 353 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 LYRM4Q9HD34 91 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 DEC1Q9P2X7 70 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SERGEFQ9UGK8 458 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SLC7A11Q9UPY5 501 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 HEBP2Q9Y5Z4 205 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SEC16AO15027 2179 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 LTBP2Q14767 1821 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 A0A1W2PP55 124 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 TNRC18O15417 2968 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 GPR137BO60478 399 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 DFFBO76075 338 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 CHRM2P08172 466 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 NPSP0C0P6 89 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 CT45A8P0DMV1 189 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 CT45A9P0DMV2 189 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SMIM10L1P0DMW3 83 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 UCP2P55851 309 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 RPL27P61353 136 aaKnown RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 QRFPP83859 136 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 ZNF77Q15935 545 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 TMEM176BQ3YBM2 270 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 PHLDA2Q53GA4 152 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 CT45A2Q5DJT8 189 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 LYZL2Q7Z4W2 148 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 LRRC18Q8N456 261 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SLC35G3Q8N808 338 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 OR51E1Q8TCB6 317 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SMIM10Q96HG1 83 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 PITPNC1Q9UKF7 332 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 OSGIN2Q9Y236 505 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 NSG1A0A0A6YYJ2 146 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 FAM221BA6H8Z2 402 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 M0R143 59 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 CDC14BO60729 498 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 GSTP1P09211 210 aaKnown RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 BLVRBP30043 206 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 VIPR2P41587 438 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 RANBP2P49792 3224 aaKnown RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 SLC37A1P57057 533 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 FZD2Q14332 565 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 ABCA11PQ4W5N1 156 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 WDR25Q64LD2 544 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 GPR137CQ8N3F9 429 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 DTD1Q8TEA8 209 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 DAZLQ92904 295 aaKnown RBP8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 LRRC3BQ96PB8 259 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 TIMM29Q9BSF4 260 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 RNF208Q9H0X6 261 aa8.41□□□□□ -1.06
NHLRC3-203ENST00000470258 OPN3Q9H1Y3 402 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms