RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 UQCC1Q9NVA1 299 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 PURGQ9UJV8 347 aaKnown RBP5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 H3BML4 177 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 TXNL1O43396 289 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 PPP1R17O96001 155 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 HOXB5P09067 269 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 ZBTB25P24278 435 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 ACKR1Q16570 336 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 CST9LP1Q5W188 147 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 LAX1Q8IWV1 398 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 SPACA3Q8IXA5 215 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 HSD17B11Q8NBQ5 300 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 LHX4Q969G2 390 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 NXF2Q9GZY0 626 aaKnown RBP5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 CXXC4Q9H2H0 198 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 BANF2Q9H503 90 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 PARP11Q9NR21 331 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 USP36Q9P275 1121 aaKnown RBP5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 XIRP1Q702N8 1843 aaKnown RBP5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 SPTY2D1-AS1A0A0U1RR47 76 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 SNRPBP14678 240 aaKnown RBP5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 STARD6P59095 220 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 ZNF787Q6DD87 383 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 C17orf78Q8N4C9 275 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 ZNF680Q8NEM1 530 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 OR4S2Q8NH73 311 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 FBXO27Q8NI29 283 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 UBALD1Q8TB05 177 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 MARS2Q96GW9 593 aaKnown RBP5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 COX14Q96I36 57 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 HES4Q9HCC6 221 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 A0A1B0GW15 77 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 ANKRD20A5PA0PJZ0 165 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 OR6C68A6NDL8 312 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 FAM24AA6NFZ4 105 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 ZNF727A8MUV8 499 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 B4GALT3O60512 393 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 SLC6A1P30531 599 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 TMEM183BQ1AE95 376 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 INO80CQ6PI98 192 aaPredicted RBP5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 OR4F17Q8NGA8 305 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 OR4C16Q8NGL9 310 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 OR4F5Q8NH21 305 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 C4orf45Q96LM5 186 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 OR4F4Q96R69 305 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 NMNAT3Q96T66 252 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 ATG101Q9BSB4 218 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 WWTR1Q9GZV5 400 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 HINT3Q9NQE9 182 aaKnown RBP5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 SIPA1L3O60292 1781 aaPredicted RBP5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 COL18A1P39060 1754 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 BCORQ6W2J9 1755 aa5.5□□□□□ -1.53
CCDC144A-212ENST00000470068 BAZ2AQ9UIF9 1905 aaKnown RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 TCAPO15273 167 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 HIST1H1DP16402 221 aaKnown RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 BRS3P32247 399 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 SUMO1P63165 101 aaKnown RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 PDZK1IP1Q13113 114 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 ZNF362Q5T0B9 420 aaPredicted RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 PMS2CLQ68D20 193 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 ABLIM2Q6H8Q1 611 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 DHRS7BQ6IAN0 325 aaPredicted RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 OGFOD3Q6PK18 319 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 OR4S1Q8NGB4 309 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 ZDHHC16Q969W1 377 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 HINT2Q9BX68 163 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 SH2D2AQ9NP31 389 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 KCMF1Q9P0J7 381 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 NAT8Q9UHE5 227 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 LSM2Q9Y333 95 aaKnown RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 A0A1W2PR48 441 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 FXYD1O00168 92 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 SCGB1D1O95968 90 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 RIPPLY3P57055 190 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 RAC3P60763 192 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 POLR2GP62487 172 aaKnown RBP eCLIP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 IZUMO4Q1ZYL8 232 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 KHDC1LQ5JSQ8 128 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 MAVSQ7Z434 540 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 MUC20Q8N307 709 aaPredicted RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 OR2M7Q8NG81 312 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 OR4A4PQ8NGN8 299 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 OR51F2Q8NH61 342 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 RTN4IP1Q8WWV3 396 aaPredicted RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 NOL4LQ96MY1 436 aaPredicted RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 SIGLEC11Q96RL6 698 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 TECRQ9NZ01 308 aaKnown RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 PSENENQ9NZ42 101 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 TAAR3PQ9P1P4 343 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 ERRFI1Q9UJM3 462 aaPredicted RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 BRWD3Q6RI45 1802 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 A0A0U1RQV5 110 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 MEIS3P1A6NDR6 274 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 AREGP15514 252 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 ZNF90Q03938 601 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 RPL18Q07020 188 aaKnown RBP5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 Q3ZCU0 254 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 VAX1Q5SQQ9 334 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 RIPPLY2Q5TAB7 128 aa5.49□□□□□ -1.53
CCDC144A-212ENST00000470068 NSUN5P2Q63ZY6 315 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms