RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ZNF684Q5T5D7 378 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 SAXO2Q658L1 398 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 CALHM1Q8IU99 346 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 CDKL3Q8IVW4 592 aaPredicted RBP3.02□□□□□ -1.93
LSM5-209ENST00000468872 PROKR2Q8NFJ6 384 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 OR10W1Q8NGF6 305 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 OR6N1Q8NGY5 312 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 SYNPRQ8TBG9 265 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 RAB1CQ92928 201 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 NAT6Q93015 286 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 TCEAL3Q969E4 200 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 FLYWCH2Q96CP2 140 aaKnown RBP3.02□□□□□ -1.93
LSM5-209ENST00000468872 RBMXL1Q96E39 390 aaKnown RBP3.02□□□□□ -1.93
LSM5-209ENST00000468872 SGTBQ96EQ0 304 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 CERS2Q96G23 380 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 ZNF488Q96MN9 340 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 CALN1Q9BXU9 219 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 SAMD10Q9BYL1 202 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 OR52D1Q9H346 318 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 MYOZ1Q9NP98 299 aaPredicted RBP3.02□□□□□ -1.93
LSM5-209ENST00000468872 DDX19AQ9NUU7 478 aaKnown RBP3.02□□□□□ -1.93
LSM5-209ENST00000468872 TECTAO75443 2155 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 NBEAL2Q6ZNJ1 2754 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 KDM3BQ7LBC6 1761 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 DOT1LQ8TEK3 1739 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 IFT172Q9UG01 1749 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 PCLOQ9Y6V0 5065 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 PRRC2BQ5JSZ5 2229 aaKnown RBP3.01□□□□□ -1.93
LSM5-209ENST00000468872 IQGAP3Q86VI3 1631 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 MROH7Q68CQ1 1323 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 NOTCH1P46531 2555 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 SMIM26A0A096LP01 95 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 IGHV1-69DA0A0B4J2H0 117 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 LINC00854A0A1B0GVQ3 168 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 ANKRD65E5RJM6 399 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 M0QX08 132 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 SOCS1O15524 211 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 RBFOX2O43251 390 aaKnown RBP eCLIP3.01□□□□□ -1.93
LSM5-209ENST00000468872 XRCC2O43543 280 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 NEMFO60524 1076 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 FOXH1O75593 365 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 APCSP02743 223 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 MRPL3P09001 348 aaKnown RBP3.01□□□□□ -1.93
LSM5-209ENST00000468872 PFN2P35080 140 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 NDUFA8P51970 172 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 GFERP55789 205 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 CACNG7P62955 275 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 DNAJC3Q13217 504 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 SLC39A6Q13433 755 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 EIF4EBP1Q13541 118 aaPredicted RBP3.01□□□□□ -1.93
LSM5-209ENST00000468872 FBXW9Q5XUX1 488 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 WDR82Q6UXN9 313 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 SNX20Q7Z614 316 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 WDFY1Q8IWB7 410 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 MYOCDQ8IZQ8 938 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 FAM184AQ8NB25 1140 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 OR4K5Q8NGD3 323 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 OR2L8Q8NGY9 312 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 NARS2Q96I59 477 aaKnown RBP3.01□□□□□ -1.93
LSM5-209ENST00000468872 BTN2A3PQ96KV6 586 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 CSPG4P5Q96PW8 444 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 HSD17B10Q99714 261 aaKnown RBP3.01□□□□□ -1.93
LSM5-209ENST00000468872 DEFB129Q9H1M3 183 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 RGCCQ9H4X1 137 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 TMEM27Q9HBJ8 222 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 SLC38A10Q9HBR0 1119 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 CD209Q9NNX6 404 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 ZC4H2Q9NQZ6 224 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 NECAP2Q9NVZ3 263 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 OPN4Q9UHM6 478 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 HYOU1Q9Y4L1 999 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 UBIAD1Q9Y5Z9 338 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 BCORQ6W2J9 1755 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 LRRK2Q5S007 2527 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 FN1P02751 2386 aaKnown RBP3.01□□□□□ -1.93
LSM5-209ENST00000468872 KMT2EQ8IZD2 1858 aa3.01□□□□□ -1.93
LSM5-209ENST00000468872 KIF24Q5T7B8 1368 aa3□□□□□ -1.93
LSM5-209ENST00000468872 DLEC1Q9Y238 1755 aa3□□□□□ -1.93
LSM5-209ENST00000468872 ADGRA3Q8IWK6 1321 aa3□□□□□ -1.93
LSM5-209ENST00000468872 A0A0G2JMZ2 1700 aa3□□□□□ -1.93
LSM5-209ENST00000468872 IGHV3OR16-9A0A0B4J2B5 98 aa3□□□□□ -1.93
LSM5-209ENST00000468872 BPY2O14599 106 aa3□□□□□ -1.93
LSM5-209ENST00000468872 RNF113AO15541 343 aaKnown RBP3□□□□□ -1.93
LSM5-209ENST00000468872 FARS2O95363 451 aaKnown RBP3□□□□□ -1.93
LSM5-209ENST00000468872 PAHP00439 452 aa3□□□□□ -1.93
LSM5-209ENST00000468872 OR8U9P0C7N5 309 aa3□□□□□ -1.93
LSM5-209ENST00000468872 OR56A5P0C7T3 313 aa3□□□□□ -1.93
LSM5-209ENST00000468872 CD37P11049 281 aa3□□□□□ -1.93
LSM5-209ENST00000468872 TCP1P17987 556 aaKnown RBP3□□□□□ -1.93
LSM5-209ENST00000468872 SRMP19623 302 aa3□□□□□ -1.93
LSM5-209ENST00000468872 CPN2P22792 545 aa3□□□□□ -1.93
LSM5-209ENST00000468872 BMI1P35226 326 aa3□□□□□ -1.93
LSM5-209ENST00000468872 PPICP45877 212 aa3□□□□□ -1.93
LSM5-209ENST00000468872 BCAP31P51572 246 aa3□□□□□ -1.93
LSM5-209ENST00000468872 ATP6V0D1P61421 351 aa3□□□□□ -1.93
LSM5-209ENST00000468872 RPL23P62829 140 aaKnown RBP3□□□□□ -1.93
LSM5-209ENST00000468872 CDK5Q00535 292 aa3□□□□□ -1.93
LSM5-209ENST00000468872 DMTNQ08495 405 aa3□□□□□ -1.93
LSM5-209ENST00000468872 C16orf72Q14CZ0 275 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms