RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 CXCR4P61073 352 aa17.9■□□□□ 0.46
TTC28-204ENST00000468807 SRSF4Q08170 494 aaKnown RBP17.9■□□□□ 0.46
TTC28-204ENST00000468807 KLRD1Q13241 179 aa17.9■□□□□ 0.46
TTC28-204ENST00000468807 ZNF322Q6U7Q0 402 aaPredicted RBP17.9■□□□□ 0.46
TTC28-204ENST00000468807 PLEKHG7Q6ZR37 379 aa17.9■□□□□ 0.46
TTC28-204ENST00000468807 SLC35F2Q8IXU6 374 aa17.9■□□□□ 0.46
TTC28-204ENST00000468807 TMEM185AQ8NFB2 350 aa17.9■□□□□ 0.46
TTC28-204ENST00000468807 ZNF671Q8TAW3 534 aa17.9■□□□□ 0.46
TTC28-204ENST00000468807 DYRK2Q92630 601 aa17.9■□□□□ 0.46
TTC28-204ENST00000468807 APOL4Q9BPW4 351 aa17.9■□□□□ 0.46
TTC28-204ENST00000468807 ELL3Q9HB65 397 aaPredicted RBP17.9■□□□□ 0.46
TTC28-204ENST00000468807 NUFIP1Q9UHK0 495 aaKnown RBP17.9■□□□□ 0.46
TTC28-204ENST00000468807 CAB39Q9Y376 341 aaPredicted RBP17.9■□□□□ 0.46
TTC28-204ENST00000468807 OR5B21A6NL26 309 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 LOC110117498-PIK3R3F6TDL0 507 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 GPR137BO60478 399 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 MTRF1O75570 445 aaKnown RBP17.89■□□□□ 0.45
TTC28-204ENST00000468807 ACAA1P09110 424 aaPredicted RBP17.89■□□□□ 0.45
TTC28-204ENST00000468807 FBP1P09467 338 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 IER3P46695 156 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 CAPZA1P52907 286 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 GUCA2AQ02747 115 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 ATP6AP1Q15904 470 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 ZNF684Q5T5D7 378 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 BCL2L15Q5TBC7 163 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 OLFML2AQ68BL7 652 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 LDLRAD3Q86YD5 345 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 ZNRF1Q8ND25 227 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 OR5A2Q8NGI9 324 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 WFDC12Q8WWY7 111 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 IL4I1Q96RQ9 567 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 DPAGT1Q9H3H5 408 aa17.89■□□□□ 0.45
TTC28-204ENST00000468807 IGKV1D-17A0A075B6S4 117 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 BTBD17A6NE02 478 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 SLC22A31A6NKX4 558 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 ZNF670-ZNF695F2Z2N8 137 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 RNASEK-C17orf49H0YIS7 233 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 DHRS3O75911 302 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 NDUFA7O95182 113 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 NRASP01111 189 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 TTRP02766 147 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 PSG2P11465 335 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 FASP25445 335 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 EPHA2P29317 976 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 ACTR3P61158 418 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 BLMHQ13867 455 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 SLX4IPQ5VYV7 408 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 NXNL2Q5VZ03 156 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 BRICD5Q6PL45 260 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 TREML4Q6UXN2 200 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 ZDHHC13Q8IUH4 622 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 PNKDQ8N490 385 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 Q8N7P7 452 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 C8orf46Q8TAG6 207 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 TMEM163Q8TC26 289 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 AQP3Q92482 292 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 DMRTB1Q96MA1 342 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 MOB1AQ9H8S9 216 aa17.88■□□□□ 0.45
TTC28-204ENST00000468807 MEIOCA2RUB1 952 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 CLPSL1A2RUU4 121 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 ZAR1LA6NP61 321 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 NPFFO15130 113 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 PAHP00439 452 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 IGLV3-1P01715 115 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 CAV3P56539 151 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 BNIP1Q12981 228 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 AADACL4Q5VUY2 407 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 C1orf146Q5VVC0 180 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 METAP1DQ6UB28 335 aaPredicted RBP17.87■□□□□ 0.45
TTC28-204ENST00000468807 AMIGO2Q86SJ2 522 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 FAM185AQ8N0U4 392 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 OR51G2Q8NGK0 314 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 NPRL2Q8WTW4 380 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 LRTOMTQ8WZ04 291 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 DUS3LQ96G46 650 aaKnown RBP17.87■□□□□ 0.45
TTC28-204ENST00000468807 ZNF488Q96MN9 340 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 TBX5Q99593 518 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 ADGRL4Q9HBW9 690 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 GPR173Q9NS66 373 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 FAM53CQ9NYF3 392 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 OR52A1Q9UKL2 312 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 R4GMQ9 66 aa17.87■□□□□ 0.45
TTC28-204ENST00000468807 A6NIN4 97 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 H0YAE9 185 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 WIPF1O43516 503 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 RPP14O95059 124 aaKnown RBP17.86■□□□□ 0.45
TTC28-204ENST00000468807 HAAOP46952 286 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 RASSF2P50749 326 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 RPL15P61313 204 aaKnown RBP17.86■□□□□ 0.45
TTC28-204ENST00000468807 ZBTB37Q5TC79 503 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 C12orf73Q69YU5 71 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 KRT74Q7RTS7 529 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 GID4Q8IVV7 300 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 BATF2Q8N1L9 274 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 ITFG2Q969R8 447 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 MNTQ99583 582 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 CLN6Q9NWW5 311 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 ZNRD1Q9P1U0 126 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 MAB21L2Q9Y586 359 aa17.86■□□□□ 0.45
TTC28-204ENST00000468807 AP4S1Q9Y587 144 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms