RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 FLOT2Q14254 428 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 DEGS2Q6QHC5 323 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 C1orf122Q6ZSJ8 110 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 MOB3CQ70IA8 216 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 PAPD5Q8NDF8 572 aaKnown RBP20.01■□□□□ 0.79
PTCH1-210ENST00000468211 C17orf50Q8WW18 174 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 LRTOMTQ8WZ04 291 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 AQP3Q92482 292 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 RBM4BQ9BQ04 359 aaKnown RBP20.01■□□□□ 0.79
PTCH1-210ENST00000468211 C16orf95Q9H693 158 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 YY1AP1Q9H869 796 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 A0A1W2PQ09 198 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 TCRBV3S1A0A5B6 114 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 ACOD1A6NK06 481 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 M0QZ24 198 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 M0R1W7 72 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 UBE2E1P51965 193 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 CRISP1P54107 249 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 ROM1Q03395 351 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 KCTD18Q6PI47 426 aaPredicted RBP20■□□□□ 0.79
PTCH1-210ENST00000468211 BCDIN3DQ7Z5W3 292 aaKnown RBP20■□□□□ 0.79
PTCH1-210ENST00000468211 TMEM185AQ8NFB2 350 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 ZNF488Q96MN9 340 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 OR8B4Q96RC9 309 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 MROQ9BYG7 248 aa20■□□□□ 0.79
PTCH1-210ENST00000468211 METTL8Q9H825 291 aaKnown RBP20■□□□□ 0.79
PTCH1-210ENST00000468211 M0R129 80 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 TIMM23O14925 209 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 MAGEB4O15481 346 aaPredicted RBP19.99■□□□□ 0.79
PTCH1-210ENST00000468211 PRKYO43930 277 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 DAPP51397 102 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 DHRS7BQ6IAN0 325 aaPredicted RBP19.99■□□□□ 0.79
PTCH1-210ENST00000468211 HAGHLQ6PII5 290 aaPredicted RBP19.99■□□□□ 0.79
PTCH1-210ENST00000468211 COMMD2Q86X83 199 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 ZNF679Q8IYX0 411 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 OR5A2Q8NGI9 324 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 AJUBAQ96IF1 538 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 POMPQ9Y244 141 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 PIGLQ9Y2B2 252 aa19.99■□□□□ 0.79
PTCH1-210ENST00000468211 PRKDCP78527 4128 aaKnown RBP19.99■□□□□ 0.79
PTCH1-210ENST00000468211 SRSF10O75494 262 aaKnown RBP19.98■□□□□ 0.79
PTCH1-210ENST00000468211 TSPAN9O75954 239 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 TTRP02766 147 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 HOXB6P17509 224 aaKnown RBP19.98■□□□□ 0.79
PTCH1-210ENST00000468211 RIPPLY1Q0D2K3 151 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 PLCXD3Q63HM9 321 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 FAHD1Q6P587 224 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 CD177Q8N6Q3 437 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 ZNF671Q8TAW3 534 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 SLC7A6OSQ96CW6 309 aaPredicted RBP19.98■□□□□ 0.79
PTCH1-210ENST00000468211 SDSLQ96GA7 329 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 MMP27Q9H306 513 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 TCF7L1Q9HCS4 588 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 PAPOLBQ9NRJ5 636 aaKnown RBP19.98■□□□□ 0.79
PTCH1-210ENST00000468211 C19orf12Q9NSK7 152 aa19.98■□□□□ 0.79
PTCH1-210ENST00000468211 NUFIP1Q9UHK0 495 aaKnown RBP19.98■□□□□ 0.79
PTCH1-210ENST00000468211 BTBD17A6NE02 478 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 OR5B21A6NL26 309 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 GYG2O15488 501 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 SYNGR1O43759 233 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 TSPAN15O95858 294 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 PAHP00439 452 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 PAX6P26367 422 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 PTGES3Q15185 160 aaKnown RBP19.97■□□□□ 0.79
PTCH1-210ENST00000468211 NCR3LG1Q68D85 454 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 ACP7Q6ZNF0 438 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 THAP5Q7Z6K1 395 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 FAM185AQ8N0U4 392 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 APOL4Q9BPW4 351 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 TEX12Q9BXU0 123 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 IKZF2Q9UKS7 526 aa19.97■□□□□ 0.79
PTCH1-210ENST00000468211 MITFO75030 526 aaPredicted RBP19.96■□□□□ 0.79
PTCH1-210ENST00000468211 ZNF254O75437 659 aa19.96■□□□□ 0.79
PTCH1-210ENST00000468211 MTRF1O75570 445 aaKnown RBP19.96■□□□□ 0.79
PTCH1-210ENST00000468211 ATP6V1B1P15313 513 aa19.96■□□□□ 0.79
PTCH1-210ENST00000468211 CEBPDP49716 269 aaPredicted RBP19.96■□□□□ 0.79
PTCH1-210ENST00000468211 RIDAP52758 137 aaKnown RBP19.96■□□□□ 0.79
PTCH1-210ENST00000468211 ACSM1Q08AH1 577 aa19.96■□□□□ 0.79
PTCH1-210ENST00000468211 LCN1P1Q5VSP4 162 aa19.96■□□□□ 0.79
PTCH1-210ENST00000468211 SLC35E4Q6ICL7 350 aa19.96■□□□□ 0.79
PTCH1-210ENST00000468211 PLEKHG7Q6ZR37 379 aa19.96■□□□□ 0.79
PTCH1-210ENST00000468211 BEND2Q8NDZ0 799 aa19.96■□□□□ 0.79
PTCH1-210ENST00000468211 RORBQ92753 470 aa19.96■□□□□ 0.79
PTCH1-210ENST00000468211 UTP4Q969X6 686 aaKnown RBP19.96■□□□□ 0.79
PTCH1-210ENST00000468211 PPA2Q9H2U2 334 aa19.96■□□□□ 0.79
PTCH1-210ENST00000468211 TET2Q6N021 2002 aaPredicted RBP19.95■□□□□ 0.78
PTCH1-210ENST00000468211 TRBV23-1A0A0A0MS06 115 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 RFPL4AA6NLU0 287 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 RFPL4AL1F8VTS6 287 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 H0YAE9 185 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 GSC2O15499 205 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 DHRS3O75911 302 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 EPHA2P29317 976 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 TGFBR2P37173 567 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 EGR3Q06889 387 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 ZNF829Q3KNS6 432 aaPredicted RBP19.95■□□□□ 0.78
PTCH1-210ENST00000468211 DNAL1Q4LDG9 190 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 ZBTB37Q5TC79 503 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 MKXQ8IYA7 352 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 C11orf42Q8N5U0 333 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms