RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CEACAM8P31997 349 aaPredicted RBP8.8□□□□□ -1
MSH5-213ENST00000468136 OPRM1P35372 400 aa8.8□□□□□ -1
MSH5-213ENST00000468136 FOXG1P55316 489 aaPredicted RBP8.8□□□□□ -1
MSH5-213ENST00000468136 TAS2R46P59540 309 aa8.8□□□□□ -1
MSH5-213ENST00000468136 TNK1Q13470 666 aa8.8□□□□□ -1
MSH5-213ENST00000468136 HIKESHIQ53FT3 197 aa8.8□□□□□ -1
MSH5-213ENST00000468136 RNASE10Q5GAN6 216 aaKnown RBP8.8□□□□□ -1
MSH5-213ENST00000468136 VAX1Q5SQQ9 334 aa8.8□□□□□ -1
MSH5-213ENST00000468136 ELP2Q6IA86 826 aa8.8□□□□□ -1
MSH5-213ENST00000468136 OR10K2Q6IF99 312 aa8.8□□□□□ -1
MSH5-213ENST00000468136 TRAPPC6BQ86SZ2 158 aa8.8□□□□□ -1
MSH5-213ENST00000468136 BIVMQ86UB2 503 aa8.8□□□□□ -1
MSH5-213ENST00000468136 FJX1Q86VR8 437 aa8.8□□□□□ -1
MSH5-213ENST00000468136 TMEM17Q86X19 198 aa8.8□□□□□ -1
MSH5-213ENST00000468136 ZNF573Q86YE8 665 aa8.8□□□□□ -1
MSH5-213ENST00000468136 SPERTQ8NA61 448 aa8.8□□□□□ -1
MSH5-213ENST00000468136 OR56B2PQ8NGI1 322 aa8.8□□□□□ -1
MSH5-213ENST00000468136 OR4C16Q8NGL9 310 aa8.8□□□□□ -1
MSH5-213ENST00000468136 STARD4Q96DR4 205 aa8.8□□□□□ -1
MSH5-213ENST00000468136 WBP1Q96G27 269 aa8.8□□□□□ -1
MSH5-213ENST00000468136 Q96M66 194 aa8.8□□□□□ -1
MSH5-213ENST00000468136 MICU1Q9BPX6 476 aa8.8□□□□□ -1
MSH5-213ENST00000468136 PAPOLGQ9BWT3 736 aaKnown RBP8.8□□□□□ -1
MSH5-213ENST00000468136 OR10A4Q9H209 315 aa8.8□□□□□ -1
MSH5-213ENST00000468136 OR51J1Q9H342 316 aa8.8□□□□□ -1
MSH5-213ENST00000468136 GHITMQ9H3K2 345 aa8.8□□□□□ -1
MSH5-213ENST00000468136 SPACA1Q9HBV2 294 aa8.8□□□□□ -1
MSH5-213ENST00000468136 ZNF71Q9NQZ8 489 aaPredicted RBP8.8□□□□□ -1
MSH5-213ENST00000468136 STARD10Q9Y365 291 aa8.8□□□□□ -1
MSH5-213ENST00000468136 TNRC6AQ8NDV7 1962 aaKnown RBP8.8□□□□□ -1
MSH5-213ENST00000468136 FRYLO94915 3013 aa8.8□□□□□ -1
MSH5-213ENST00000468136 PQLC2LA1A4F0 135 aa8.79□□□□□ -1
MSH5-213ENST00000468136 TMEM235A6NFC5 223 aa8.79□□□□□ -1
MSH5-213ENST00000468136 OR5H1A6NKK0 313 aa8.79□□□□□ -1
MSH5-213ENST00000468136 FOXI3A8MTJ6 420 aaPredicted RBP8.79□□□□□ -1
MSH5-213ENST00000468136 MSTNO14793 375 aa8.79□□□□□ -1
MSH5-213ENST00000468136 CREBL2O60519 120 aaPredicted RBP8.79□□□□□ -1
MSH5-213ENST00000468136 RAD51DO75771 328 aa8.79□□□□□ -1
MSH5-213ENST00000468136 PDGFAP04085 211 aa8.79□□□□□ -1
MSH5-213ENST00000468136 CD3DP04234 171 aa8.79□□□□□ -1
MSH5-213ENST00000468136 IFNA6P05013 189 aa8.79□□□□□ -1
MSH5-213ENST00000468136 SERPINA2P20848 420 aa8.79□□□□□ -1
MSH5-213ENST00000468136 DTYMKP23919 212 aa8.79□□□□□ -1
MSH5-213ENST00000468136 BLVRBP30043 206 aaPredicted RBP8.79□□□□□ -1
MSH5-213ENST00000468136 CCR6P51684 374 aa8.79□□□□□ -1
MSH5-213ENST00000468136 UBE2MP61081 183 aaKnown RBP8.79□□□□□ -1
MSH5-213ENST00000468136 GNG3P63215 75 aa8.79□□□□□ -1
MSH5-213ENST00000468136 MRPS15P82914 257 aaKnown RBP8.79□□□□□ -1
MSH5-213ENST00000468136 PRDX4Q13162 271 aa8.79□□□□□ -1
MSH5-213ENST00000468136 ARFRP1Q13795 201 aa8.79□□□□□ -1
MSH5-213ENST00000468136 MOGAT2Q3SYC2 334 aa8.79□□□□□ -1
MSH5-213ENST00000468136 ZFP69Q49AA0 526 aa8.79□□□□□ -1
MSH5-213ENST00000468136 TIMM23BQ5SRD1 257 aa8.79□□□□□ -1
MSH5-213ENST00000468136 SFRP4Q6FHJ7 346 aaPredicted RBP8.79□□□□□ -1
MSH5-213ENST00000468136 FAHD2BQ6P2I3 314 aaPredicted RBP8.79□□□□□ -1
MSH5-213ENST00000468136 CRIP3Q6Q6R5 217 aa8.79□□□□□ -1
MSH5-213ENST00000468136 BHLHA15Q7RTS1 189 aaPredicted RBP8.79□□□□□ -1
MSH5-213ENST00000468136 LIX1LQ8IVB5 337 aa8.79□□□□□ -1
MSH5-213ENST00000468136 Q8IYB0 196 aa8.79□□□□□ -1
MSH5-213ENST00000468136 GCNT2Q8N0V5 402 aa8.79□□□□□ -1
MSH5-213ENST00000468136 OSR2Q8N2R0 312 aa8.79□□□□□ -1
MSH5-213ENST00000468136 ZDHHC22Q8N966 263 aa8.79□□□□□ -1
MSH5-213ENST00000468136 TMEM104Q8NE00 496 aa8.79□□□□□ -1
MSH5-213ENST00000468136 ST8SIA4Q92187 359 aa8.79□□□□□ -1
MSH5-213ENST00000468136 FAHD2AQ96GK7 314 aa8.79□□□□□ -1
MSH5-213ENST00000468136 SPACA5Q96QH8 159 aa8.79□□□□□ -1
MSH5-213ENST00000468136 GINS4Q9BRT9 223 aa8.79□□□□□ -1
MSH5-213ENST00000468136 PKIBQ9C010 78 aa8.79□□□□□ -1
MSH5-213ENST00000468136 KCNK15Q9H427 330 aa8.79□□□□□ -1
MSH5-213ENST00000468136 ELL3Q9HB65 397 aaPredicted RBP8.79□□□□□ -1
MSH5-213ENST00000468136 SPEF1Q9Y4P9 236 aa8.79□□□□□ -1
MSH5-213ENST00000468136 MED12LQ86YW9 2145 aa8.78□□□□□ -1
MSH5-213ENST00000468136 WDFY3Q8IZQ1 3526 aa8.78□□□□□ -1
MSH5-213ENST00000468136 FREM1Q5H8C1 2179 aa8.78□□□□□ -1
MSH5-213ENST00000468136 TRAV6A0A075B6T7 132 aa8.78□□□□□ -1
MSH5-213ENST00000468136 A0A0A6YYJ9 748 aa8.78□□□□□ -1
MSH5-213ENST00000468136 A0A0B4J293 547 aa8.78□□□□□ -1
MSH5-213ENST00000468136 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.78□□□□□ -1
MSH5-213ENST00000468136 ZNF503-AS2A6NEH8 195 aa8.78□□□□□ -1
MSH5-213ENST00000468136 TMEM210A6NLX4 147 aa8.78□□□□□ -1
MSH5-213ENST00000468136 ZNF850A8MQ14 1090 aa8.78□□□□□ -1
MSH5-213ENST00000468136 IQCF6A8MYZ5 107 aa8.78□□□□□ -1
MSH5-213ENST00000468136 BOLA2-SMG1P6H3BVE0 249 aa8.78□□□□□ -1
MSH5-213ENST00000468136 SMPD2O60906 423 aa8.78□□□□□ -1
MSH5-213ENST00000468136 HTR3BO95264 441 aa8.78□□□□□ -1
MSH5-213ENST00000468136 IGLV1-44P01699 117 aa8.78□□□□□ -1
MSH5-213ENST00000468136 FCER2P06734 321 aa8.78□□□□□ -1
MSH5-213ENST00000468136 ACAA1P09110 424 aaPredicted RBP8.78□□□□□ -1
MSH5-213ENST00000468136 SFTPCP11686 197 aa8.78□□□□□ -1
MSH5-213ENST00000468136 GNB3P16520 340 aa8.78□□□□□ -1
MSH5-213ENST00000468136 ANOS1P23352 680 aa8.78□□□□□ -1
MSH5-213ENST00000468136 IL32P24001 234 aa8.78□□□□□ -1
MSH5-213ENST00000468136 ERP29P30040 261 aaKnown RBP8.78□□□□□ -1
MSH5-213ENST00000468136 WNT5AP41221 380 aa8.78□□□□□ -1
MSH5-213ENST00000468136 UCP2P55851 309 aa8.78□□□□□ -1
MSH5-213ENST00000468136 TMEM50BP56557 158 aa8.78□□□□□ -1
MSH5-213ENST00000468136 TAS2R31P59538 309 aa8.78□□□□□ -1
MSH5-213ENST00000468136 PPP1CBP62140 327 aa8.78□□□□□ -1
MSH5-213ENST00000468136 GRK1Q15835 563 aa8.78□□□□□ -1
MSH5-213ENST00000468136 SRSF7Q16629 238 aaKnown RBP eCLIP8.78□□□□□ -19e-6■□□□□ 10.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms