RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SP140LQ9H930 580 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 ISYNA1Q9NPH2 558 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 PAPOLBQ9NRJ5 636 aaKnown RBP8.04□□□□□ -1.12
HDAC3-203ENST00000467533 MOB4Q9Y3A3 225 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 HSPE1-MOB4S4R3N1 261 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 HECTD4Q9Y4D8 3996 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 IGHV2-26A0A0B4J1V2 119 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 RFPL4AA6NLU0 287 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 ZNF850A8MQ14 1090 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 RFPL4AL1F8VTS6 287 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 RPLP1P05386 114 aaKnown RBP8.03□□□□□ -1.12
HDAC3-203ENST00000467533 ANXA2P07355 339 aaKnown RBP8.03□□□□□ -1.12
HDAC3-203ENST00000467533 ZNF823P16415 610 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 YAP1P46937 504 aaKnown RBP8.03□□□□□ -1.12
HDAC3-203ENST00000467533 GSK3AP49840 483 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 KIR2DS1Q14954 304 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 SNCBQ16143 134 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 MBOAT2Q6ZWT7 520 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 RNF113BQ8IZP6 322 aaKnown RBP8.03□□□□□ -1.12
HDAC3-203ENST00000467533 OFCC1Q8IZS5 231 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 CD177Q8N6Q3 437 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 ZNF676Q8N7Q3 588 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 OR10A6Q8NH74 314 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 OR5P3Q8WZ94 311 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 FAM46AQ96IP4 442 aaKnown RBP8.03□□□□□ -1.12
HDAC3-203ENST00000467533 CGREF1Q99674 301 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 FNDC11Q9BVV2 318 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 FN3KQ9H479 309 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 ABCB9Q9NP78 766 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 RPRD1BQ9NQG5 326 aaKnown RBP8.03□□□□□ -1.12
HDAC3-203ENST00000467533 THAP1Q9NVV9 213 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 MRPL22Q9NWU5 206 aaKnown RBP8.03□□□□□ -1.12
HDAC3-203ENST00000467533 KCNG2Q9UJ96 466 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 MPC1Q9Y5U8 109 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 SORL1Q92673 2214 aa8.03□□□□□ -1.12
HDAC3-203ENST00000467533 A0A087WUU8 490 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 SNNO75324 88 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 MTRF1O75570 445 aaKnown RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 TXNDC12O95881 172 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 IGHV4-30-4P0DP06 118 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 SPNP16150 400 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 CFL1P23528 166 aaKnown RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 NOS3P29474 1203 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 DCTDP32321 178 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 CX3CR1P49238 355 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 POU3F4P49335 361 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 MRPL19P49406 292 aaKnown RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 CBX1P83916 185 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 SMIM21Q3B7S5 101 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 LRRC23Q53EV4 343 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 AGKQ53H12 422 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 CXorf66Q5JRM2 361 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 NANOGP8Q6NSW7 305 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 TEX38Q6PEX7 206 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 TBPL2Q6SJ96 375 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 RRM2BQ7LG56 351 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 DRAM1Q8N682 238 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 HPSE2Q8WWQ2 592 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 RSRC1Q96IZ7 334 aaKnown RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 TPD52L3Q96J77 140 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 ZNF714Q96N38 554 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 ERMAPQ96PL5 475 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 NMNAT3Q96T66 252 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 KCNJ15Q99712 375 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 CLEC7AQ9BXN2 247 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 ROPN1BQ9BZX4 212 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 FGF23Q9GZV9 251 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 KAT8Q9H7Z6 458 aaKnown RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 ROPN1Q9HAT0 212 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-203ENST00000467533 CENPMQ9NSP4 180 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 SIGLEC7Q9Y286 467 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 TMEM5Q9Y2B1 443 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 DSCAML1Q8TD84 2053 aa8.02□□□□□ -1.13
HDAC3-203ENST00000467533 J3KTA2 159 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 SAP30O75446 220 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 IFNA14P01570 189 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 TK1P04183 234 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 PRDX2P32119 198 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 GPM6AP51674 278 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 EDDM3BP56851 147 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 EIF2B1Q14232 305 aaKnown RBP8.01□□□□□ -1.13
HDAC3-203ENST00000467533 KLHL12Q53G59 568 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 DPY19L2P2Q6ZN68 376 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 ACP7Q6ZNF0 438 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 ZBTB49Q6ZSB9 765 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 DCXRQ7Z4W1 244 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 SLC35E3Q7Z769 313 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 ZNF429Q86V71 674 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 FOXRED2Q8IWF2 684 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 TIGD4Q8IY51 512 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 ZDHHC23Q8IYP9 409 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 STPG2Q8N412 459 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 EIF1ADQ8N9N8 165 aaKnown RBP8.01□□□□□ -1.13
HDAC3-203ENST00000467533 OR4P4Q8NGL7 312 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 ZNF671Q8TAW3 534 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 PIGCQ92535 297 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 SGK3Q96BR1 496 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 SLAMF6Q96DU3 332 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 HIST1H2AAQ96QV6 131 aa8.01□□□□□ -1.13
HDAC3-203ENST00000467533 TMEM133Q9H2Q1 129 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms