RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 Q6ZSR3 168 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 DOK3Q7L591 496 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 TMEM200AQ86VY9 491 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 FBXL14Q8N1E6 418 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 MUC15Q8N387 334 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 FTMTQ8N4E7 242 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 PLPP7Q8NBV4 271 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 THRSPQ92748 146 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 RNF170Q96K19 258 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 PDCD1LG2Q9BQ51 273 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 SLITRK2Q9H156 845 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 PLK3Q9H4B4 646 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 GPR160Q9UJ42 338 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 FBXO9Q9UK97 447 aaPredicted RBP12.64□□□□□ -0.39
DDX56-208ENST00000467318 HHLA2Q9UM44 414 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 A0A0B4J293 547 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 A0A1B0GTI1 187 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 hCG_38984A0A1B0GV85 526 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 DHRS7CA6NNS2 312 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 B9A039 149 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 P2RY10O00398 339 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 SULT1B1O43704 296 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 DHRS3O75911 302 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 KITLGP21583 273 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 ACHEP22303 614 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 MPV17P39210 176 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 OR10A3P58181 314 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 CD83Q01151 205 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 RIPPLY1Q0D2K3 151 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 MADCAM1Q13477 382 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 DYRK1AQ13627 763 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 ODF4Q2M2E3 257 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 PLA1AQ53H76 456 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 TOMM5Q8N4H5 51 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 LYZL4Q96KX0 146 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 TMEM246Q9BRR3 403 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 MRPL37Q9BZE1 423 aaKnown RBP12.63□□□□□ -0.39
DDX56-208ENST00000467318 PLEKHF2Q9H8W4 249 aa12.63□□□□□ -0.39
DDX56-208ENST00000467318 CGGBP1Q9UFW8 167 aaPredicted RBP12.63□□□□□ -0.39
DDX56-208ENST00000467318 GGT3PA6NGU5 568 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 CD300LBA8K4G0 201 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 A8MV72 311 aaPredicted RBP12.62□□□□□ -0.39
DDX56-208ENST00000467318 IQCF6A8MYZ5 107 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 SRMP19623 302 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 GSK3AP49840 483 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 MSMPQ1L6U9 139 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 CEP78Q5JTW2 689 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 FAM27D1Q5T7N8 215 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 CSNK2A3Q8NEV1 391 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 ZNF671Q8TAW3 534 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 C10orf35Q96D05 121 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 FAM71F1Q96KD3 344 aaPredicted RBP12.62□□□□□ -0.39
DDX56-208ENST00000467318 PURGQ9UJV8 347 aaKnown RBP12.62□□□□□ -0.39
DDX56-208ENST00000467318 FZR1Q9UM11 496 aa12.62□□□□□ -0.39
DDX56-208ENST00000467318 LOC107986453A0A1B0GWG9 222 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 NAP1L6A6NFF2 107 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 TIMM8AO60220 97 aaPredicted RBP12.61□□□□□ -0.39
DDX56-208ENST00000467318 ECDO95905 644 aaPredicted RBP12.61□□□□□ -0.39
DDX56-208ENST00000467318 GZMKP49863 264 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 RPS11P62280 158 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDX56-208ENST00000467318 MRPS10P82664 201 aaKnown RBP12.61□□□□□ -0.39
DDX56-208ENST00000467318 TNK1Q13470 666 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 ZBTB37Q5TC79 503 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 ZNF787Q6DD87 383 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 OR2T2Q6IF00 324 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 C20orf204Q6ZNR8 217 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 LRP11Q86VZ4 500 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 SEMA6DQ8NFY4 1073 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 GPR148Q8TDV2 347 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 UPRTQ96BW1 309 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 FYTTD1Q96QD9 318 aaKnown RBP12.61□□□□□ -0.39
DDX56-208ENST00000467318 ABHD1Q96SE0 405 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 SYT3Q9BQG1 590 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 MED28Q9H204 178 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 UBTD1Q9HAC8 227 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 TMEM165Q9HC07 324 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 CBLN4Q9NTU7 201 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 NBPF19A0A087WUL8 3843 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 CELSR2Q9HCU4 2923 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 CENPEQ02224 2701 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 PLSCR5A0PG75 271 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 DANCRP0C864 163 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 CALCBP10092 127 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 ATF1P18846 271 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 AP3S2P59780 193 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 SLC7A5P1Q8MH63 180 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 OR56B2PQ8NGI1 322 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 OR14K1Q8NGZ2 314 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 HYLS1Q96M11 299 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 MRPL15Q9P015 296 aaKnown RBP12.61□□□□□ -0.39
DDX56-208ENST00000467318 TAAR3PQ9P1P4 343 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 ING4Q9UNL4 249 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 V9GYS6 101 aa12.61□□□□□ -0.39
DDX56-208ENST00000467318 FBN2P35556 2912 aa12.6□□□□□ -0.39
DDX56-208ENST00000467318 PAHP00439 452 aa12.6□□□□□ -0.39
DDX56-208ENST00000467318 RAF1P04049 648 aa12.6□□□□□ -0.39
DDX56-208ENST00000467318 ACKR3P25106 362 aa12.6□□□□□ -0.39
DDX56-208ENST00000467318 RCVRNP35243 200 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms