RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 BLMHQ13867 455 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 SNAPC1Q16533 368 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 DMRTC1Q5HYR2 192 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 DEGS2Q6QHC5 323 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 KRT74Q7RTS7 529 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 TRPM8Q7Z2W7 1104 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 THAP5Q7Z6K1 395 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 SPATA24Q86W54 205 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 ZNRF1Q8ND25 227 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 TMEM185AQ8NFB2 350 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 OR5R1Q8NH85 324 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 ZNF671Q8TAW3 534 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 MAB21L2Q9Y586 359 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 NOTCH1P46531 2555 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 DSCAML1Q8TD84 2053 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 OR5B21A6NL26 309 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 GSC2O15499 205 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 ATP6V1B1P15313 513 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 TGFBR2P37173 567 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 CBX1P83916 185 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 ACSM1Q08AH1 577 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 RIPPLY1Q0D2K3 151 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 PLCXD3Q63HM9 321 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 MOB3CQ70IA8 216 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 FAM185AQ8N0U4 392 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 OR5A2Q8NGI9 324 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 OR51E1Q8TCB6 317 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 ITFG2Q969R8 447 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 TEAD3Q99594 435 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 TTTY10Q9BZA0 68 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 PBOV1Q9GZY1 135 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 YY1AP1Q9H869 796 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 GPR84Q9NQS5 396 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 TVP23BQ9NYZ1 205 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 ZNF222Q9UK12 451 aa15.66■□□□□ 0.1
COL9A3-206ENST00000466532 TRBV23-1A0A0A0MS06 115 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 CCDC182A6NF36 153 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 ANKRD61A6NGH8 418 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 SLC22A31A6NKX4 558 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 PRR32B1ATL7 298 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 H0YAE9 185 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 TSPAN9O75954 239 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 FAHP16930 419 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 FLOT2Q14254 428 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 LCN1P1Q5VSP4 162 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 HAGHLQ6PII5 290 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-206ENST00000466532 AQP3Q92482 292 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 OR8B4Q96RC9 309 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 DNAJB9Q9UBS3 223 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 PIGLQ9Y2B2 252 aa15.65■□□□□ 0.1
COL9A3-206ENST00000466532 FKBP6O75344 327 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 ZNF254O75437 659 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 IGLV3-1P01715 115 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 RIDAP52758 137 aaKnown RBP15.64■□□□□ 0.09
COL9A3-206ENST00000466532 CAPZA1P52907 286 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 CRISP1P54107 249 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 ROM1Q03395 351 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 EGR3Q06889 387 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 ZNF829Q3KNS6 432 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-206ENST00000466532 HCP5Q6MZN7 132 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 ZNF679Q8IYX0 411 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 BEND2Q8NDZ0 799 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 OR5D13Q8NGL4 314 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 PPP1R14AQ96A00 147 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 SDSLQ96GA7 329 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 PPA2Q9H2U2 334 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 ENPP5Q9UJA9 477 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 IKZF2Q9UKS7 526 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 COPS3Q9UNS2 423 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 SF3B6Q9Y3B4 125 aaKnown RBP15.64■□□□□ 0.09
COL9A3-206ENST00000466532 TMEM14AQ9Y6G1 99 aa15.64■□□□□ 0.09
COL9A3-206ENST00000466532 H3BUX3 64 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 ANGPTL7O43827 346 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 DHRS3O75911 302 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 TSPAN15O95858 294 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 MFGE8Q08431 387 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-206ENST00000466532 ZBTB37Q5TC79 503 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 SLC35E4Q6ICL7 350 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 ACP7Q6ZNF0 438 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 C17orf50Q8WW18 174 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 ASB17Q8WXJ9 295 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 DNAJC9Q8WXX5 260 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 ZNF488Q96MN9 340 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 PAPOLBQ9NRJ5 636 aaKnown RBP15.63■□□□□ 0.09
COL9A3-206ENST00000466532 C19orf12Q9NSK7 152 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 RASL12Q9NYN1 266 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 NUFIP1Q9UHK0 495 aaKnown RBP15.63■□□□□ 0.09
COL9A3-206ENST00000466532 GTF2A1LQ9UNN4 478 aa15.63■□□□□ 0.09
COL9A3-206ENST00000466532 RFPL4AA6NLU0 287 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 RFPL4AL1F8VTS6 287 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 GYG2O15488 501 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 MTRF1O75570 445 aaKnown RBP15.62■□□□□ 0.09
COL9A3-206ENST00000466532 NRASP01111 189 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 TTRP02766 147 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 SMIM21Q3B7S5 101 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 DNAL1Q4LDG9 190 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 ZNF684Q5T5D7 378 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 POC1AQ8NBT0 407 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 OR51G2Q8NGK0 314 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 CNN2Q99439 309 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms