RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 PTGER4P35408 488 aa16.93■□□□□ 0.3
LIMS2-212ENST00000466410 GUCA2BQ16661 112 aa16.93■□□□□ 0.3
LIMS2-212ENST00000466410 HLA-BQ31612 363 aa16.93■□□□□ 0.3
LIMS2-212ENST00000466410 PUSL1Q8N0Z8 303 aaKnown RBP16.93■□□□□ 0.3
LIMS2-212ENST00000466410 WDR54Q9H977 334 aa16.93■□□□□ 0.3
LIMS2-212ENST00000466410 COLQQ9Y215 455 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-212ENST00000466410 PTRH2Q9Y3E5 179 aaKnown RBP16.93■□□□□ 0.3
LIMS2-212ENST00000466410 FGF5P12034 268 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 DSCR4P56555 118 aaPredicted RBP16.92■□□□□ 0.3
LIMS2-212ENST00000466410 S100A10P60903 97 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 ULBP2Q9BZM5 246 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 GPR173Q9NS66 373 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 FOXD3Q9UJU5 478 aaPredicted RBP16.92■□□□□ 0.3
LIMS2-212ENST00000466410 PCDHGA1Q9Y5H4 931 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 A0A0J9YW62 118 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 FIGNL2A6NMB9 653 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 TNFSF11O14788 317 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 VAMP5O95183 116 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 CSTBP04080 98 aaKnown RBP16.92■□□□□ 0.3
LIMS2-212ENST00000466410 SFTPBP07988 381 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 COX6A1P12074 109 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 Q6ZSR3 168 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 FOXRED2Q8IWF2 684 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 ARL11Q969Q4 196 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 SGK3Q96BR1 496 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 ADAT1Q9BUB4 502 aaKnown RBP16.92■□□□□ 0.3
LIMS2-212ENST00000466410 SLC5A7Q9GZV3 580 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 DKKL1Q9UK85 242 aa16.92■□□□□ 0.3
LIMS2-212ENST00000466410 MSTNO14793 375 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 ACKR3P25106 362 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 PRSS12P56730 875 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 STK11Q15831 433 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 OR4A4PQ8NGN8 299 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 OR2AE1Q8NHA4 323 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 MR1Q95460 341 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 CDX2Q99626 313 aaPredicted RBP16.91■□□□□ 0.3
LIMS2-212ENST00000466410 PLEKHJ1Q9NW61 149 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 MTRF1O75570 445 aaKnown RBP16.91■□□□□ 0.3
LIMS2-212ENST00000466410 SERPINA5P05154 406 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 CYC1P08574 325 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 TMEM225BP0DP42 221 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 MST1LQ2TV78 715 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 PABPC1L2AQ5JQF8 200 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 SEMA6DQ8NFY4 1073 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 NAA11Q9BSU3 229 aaPredicted RBP16.91■□□□□ 0.3
LIMS2-212ENST00000466410 SRXN1Q9BYN0 137 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 PRDM6Q9NQX0 595 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 ZNF581Q9P0T4 197 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 NXT1Q9UKK6 140 aaKnown RBP16.91■□□□□ 0.3
LIMS2-212ENST00000466410 C14orf166Q9Y224 244 aaKnown RBP16.91■□□□□ 0.3
LIMS2-212ENST00000466410 HS3ST3B1Q9Y662 390 aa16.91■□□□□ 0.3
LIMS2-212ENST00000466410 ZNF705EA8MWA4 302 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-212ENST00000466410 ANGPTL7O43827 346 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 KLF7O75840 302 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-212ENST00000466410 SURF2Q15527 256 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-212ENST00000466410 NSUN5P2Q63ZY6 315 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 MAML2Q8IZL2 1156 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-212ENST00000466410 IFI44Q8TCB0 444 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 Q96M66 194 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 ZNF2Q9BSG1 426 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-212ENST00000466410 ZNF700Q9H0M5 742 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 TMEM231Q9H6L2 316 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 PCDHB16Q9NRJ7 776 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 MUC3AQ02505 3323 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 DMDP11532 3685 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 SSR4P51571 173 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 MTCP1P56278 107 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 RBM39Q14498 530 aaKnown RBP16.9■□□□□ 0.3
LIMS2-212ENST00000466410 TMEM88Q6PEY1 159 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 SPTSSAQ969W0 71 aa16.9■□□□□ 0.3
LIMS2-212ENST00000466410 ZNF629Q9UEG4 869 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-212ENST00000466410 PURGQ9UJV8 347 aaKnown RBP16.9■□□□□ 0.3
LIMS2-212ENST00000466410 IFNA2P01563 188 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 ZNF84P51523 738 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 CHAF1BQ13112 559 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 IL11RAQ14626 422 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 CCDC157Q569K6 752 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 RPUSD3Q6P087 351 aaKnown RBP16.89■□□□□ 0.3
LIMS2-212ENST00000466410 LDLRAD3Q86YD5 345 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 TMEM156Q8N614 296 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 NAT6Q93015 286 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 DNAJB11Q9UBS4 358 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 LPAR3Q9UBY5 353 aa16.89■□□□□ 0.3
LIMS2-212ENST00000466410 KIAA1549Q9HCM3 1950 aa16.89■□□□□ 0.29
LIMS2-212ENST00000466410 CA11O75493 328 aa16.89■□□□□ 0.29
LIMS2-212ENST00000466410 KLK3P07288 261 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-212ENST00000466410 CCL4P13236 92 aa16.89■□□□□ 0.29
LIMS2-212ENST00000466410 ARL6IP1Q15041 203 aa16.89■□□□□ 0.29
LIMS2-212ENST00000466410 EXT1Q16394 746 aa16.89■□□□□ 0.29
LIMS2-212ENST00000466410 ZNF468Q5VIY5 522 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-212ENST00000466410 FAM27BQ5VT28 67 aa16.89■□□□□ 0.29
LIMS2-212ENST00000466410 C20orf196Q8IYI0 205 aa16.89■□□□□ 0.29
LIMS2-212ENST00000466410 SVBPQ8N300 66 aa16.89■□□□□ 0.29
LIMS2-212ENST00000466410 FAAP24Q9BTP7 215 aa16.89■□□□□ 0.29
LIMS2-212ENST00000466410 SPRY1O43609 319 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-212ENST00000466410 APOC1P02654 83 aa16.88■□□□□ 0.29
LIMS2-212ENST00000466410 PET100P0DJ07 73 aa16.88■□□□□ 0.29
LIMS2-212ENST00000466410 NTF4P34130 210 aa16.88■□□□□ 0.29
LIMS2-212ENST00000466410 HGFACQ04756 655 aa16.88■□□□□ 0.29
LIMS2-212ENST00000466410 SCRN3Q0VDG4 424 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms