RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 OR1K1Q8NGR3 316 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 SPSB4Q96A44 273 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 SLC25A21Q9BQT8 299 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-205ENST00000466192 PLSCR2Q9NRY7 297 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 GHRLQ9UBU3 117 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 DMXL2Q8TDJ6 3036 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 TMEM82A0PJX8 343 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 C5orf49A4QMS7 147 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 XRCC2O43543 280 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 COX5BP10606 129 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 SPINK2P20155 84 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 ARR3P36575 388 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 MTCP1P56278 107 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 CXADRP78310 365 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 MEF2DQ14814 521 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 OR8B8Q15620 311 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 TMEM42Q69YG0 159 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 GCNT2Q8N0V5 402 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 MUC20Q8N307 709 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-205ENST00000466192 FAM230AA0A1W2PPH8 454 aa15.81■□□□□ 0.12
COL9A3-205ENST00000466192 OR14I1A6ND48 311 aa15.81■□□□□ 0.12
COL9A3-205ENST00000466192 DISC1C4P0D8 188 aa15.81■□□□□ 0.12
COL9A3-205ENST00000466192 RAD51DO75771 328 aa15.81■□□□□ 0.12
COL9A3-205ENST00000466192 GSTP1P09211 210 aaKnown RBP15.81■□□□□ 0.12
COL9A3-205ENST00000466192 RPS27AP62979 156 aaKnown RBP15.81■□□□□ 0.12
COL9A3-205ENST00000466192 FAM189A2Q15884 450 aa15.81■□□□□ 0.12
COL9A3-205ENST00000466192 OR13C8Q8NGS7 320 aa15.81■□□□□ 0.12
COL9A3-205ENST00000466192 BCL2L2Q92843 193 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-205ENST00000466192 SPSB1Q96BD6 273 aa15.81■□□□□ 0.12
COL9A3-205ENST00000466192 ANKRD11Q6UB99 2663 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-205ENST00000466192 G3V3Q6 166 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 TSC22D2O75157 780 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 PDGFAP04085 211 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 CLVS2Q5SYC1 327 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 ZNF767PQ75MW2 155 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 SLC38A6Q8IZM9 456 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 GLRX2Q9NS18 164 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 APC2O95996 2303 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 IGKV1-27A0A075B6S5 117 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 PLATP00750 562 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 NRASP01111 189 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 TMEM225BP0DP42 221 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 IQCF2Q8IXL9 164 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 FAM89BQ8N5H3 189 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 SARAFQ96BY9 339 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 POM121L2Q96KW2 1035 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 CITED4Q96RK1 184 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 PTTG3PQ9NZH4 202 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 PIPOXQ9P0Z9 390 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 PLEKHA6Q9Y2H5 1048 aa15.8■□□□□ 0.12
COL9A3-205ENST00000466192 DSPP15924 2871 aaKnown RBP15.8■□□□□ 0.12
COL9A3-205ENST00000466192 MFNGO00587 321 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 OR4E1P0C645 316 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 BLVRBP30043 206 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-205ENST00000466192 FOXC1Q12948 553 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 CNN3Q15417 329 aaKnown RBP15.79■□□□□ 0.12
COL9A3-205ENST00000466192 GUSBP1Q15486 140 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 C2orf68Q2NKX9 166 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 ATPAF1Q5TC12 328 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-205ENST00000466192 TFAP2EQ6VUC0 442 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 C17orf107Q6ZR85 190 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 SNAPC3Q92966 411 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 WDR89Q96FK6 387 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-205ENST00000466192 PRRT1Q99946 306 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 EIF3KQ9UBQ5 218 aaKnown RBP15.79■□□□□ 0.12
COL9A3-205ENST00000466192 PRELID1Q9Y255 219 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 INTS1Q8N201 2190 aaKnown RBP15.79■□□□□ 0.12
COL9A3-205ENST00000466192 ANGPTL7O43827 346 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 SIX6O95475 246 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 PMP2P02689 132 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 ARFRP1Q13795 201 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 FAM214BQ7L5A3 538 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 SNIP1Q8TAD8 396 aaKnown RBP15.79■□□□□ 0.12
COL9A3-205ENST00000466192 CCDC107Q8WV48 283 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 ALX4Q9H161 411 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-205ENST00000466192 SLC2A8Q9NY64 477 aa15.79■□□□□ 0.12
COL9A3-205ENST00000466192 K7EM74 188 aa15.78■□□□□ 0.12
COL9A3-205ENST00000466192 SHOXO15266 292 aa15.78■□□□□ 0.12
COL9A3-205ENST00000466192 SPRY1O43609 319 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-205ENST00000466192 PRKACBP22694 351 aa15.78■□□□□ 0.12
COL9A3-205ENST00000466192 PLP2Q04941 152 aa15.78■□□□□ 0.12
COL9A3-205ENST00000466192 GK2Q14410 553 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-205ENST00000466192 STEAP2Q8NFT2 490 aa15.78■□□□□ 0.12
COL9A3-205ENST00000466192 OR4K15Q8NH41 348 aa15.78■□□□□ 0.12
COL9A3-205ENST00000466192 KCNN3Q9UGI6 736 aa15.78■□□□□ 0.12
COL9A3-205ENST00000466192 VSIG4Q9Y279 399 aa15.78■□□□□ 0.12
COL9A3-205ENST00000466192 ZNF816-ZNF321PA0A0X1KG74 233 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 B8ZZF3 427 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 NGFP01138 241 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 IFNA6P05013 189 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 GIPP09681 153 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-205ENST00000466192 PNLIPRP3Q17RR3 467 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 Q6ZS92 163 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 C9orf106Q8NAJ2 232 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 NAXEQ8NCW5 288 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 OR2AK2Q8NG84 335 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 PIGCQ92535 297 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 APOBEC3DQ96AK3 386 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-205ENST00000466192 MRGPRFQ96AM1 343 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 REPIN1Q9BWE0 567 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms