RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 DNAJC13O75165 2243 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 A0A096LPE4 126 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 A0A1B0GW55 424 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 A0A1W2PPZ6 126 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 DHRS7CA6NNS2 312 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 ATP6V1G2-DDX39BF2Z307 99 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 VAMP5O95183 116 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 DUX4L2P0CJ85 424 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 DUX4L3P0CJ86 424 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 DUX4L4P0CJ87 422 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 DUX4L5P0CJ88 424 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 DUX4L6P0CJ89 424 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 DUX4L7P0CJ90 424 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 RAB32Q13637 225 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 CDCP2Q5VXM1 449 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 MRPS24Q96EL2 167 aaKnown RBP14.29□□□□□ -0.12
SLX4-202ENST00000466154 SMIM3Q9BZL3 60 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 CHST5Q9GZS9 411 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 MYOZ1Q9NP98 299 aaPredicted RBP14.29□□□□□ -0.12
SLX4-202ENST00000466154 DUX4Q9UBX2 424 aa14.29□□□□□ -0.12
SLX4-202ENST00000466154 C14orf166Q9Y224 244 aaKnown RBP14.29□□□□□ -0.12
SLX4-202ENST00000466154 THBS4P35443 961 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 DUSP3P51452 185 aaPredicted RBP14.28□□□□□ -0.12
SLX4-202ENST00000466154 SLC16A14Q7RTX9 510 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 ARRDC1Q8N5I2 433 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 ZSCAN4Q8NAM6 433 aaPredicted RBP14.28□□□□□ -0.12
SLX4-202ENST00000466154 OR10D3Q8NH80 312 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 BORCS8Q96FH0 119 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 RTBDNQ9BSG5 229 aaPredicted RBP14.28□□□□□ -0.12
SLX4-202ENST00000466154 SLC25A32Q9H2D1 315 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 PCDHB10Q9UN67 800 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 A8MXK9 166 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 H0YIZ8 118 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 SFT2D2O95562 160 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 FGF2P09038 288 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 MC2RQ01718 297 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 KCNMB1Q16558 191 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 PIGYQ3MUY2 71 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 CLEC9AQ6UXN8 241 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 BPIFCQ8NFQ6 507 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 FGFBP3Q8TAT2 258 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 M1APQ8TC57 530 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 HAS2Q92819 552 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 TMEM54Q969K7 222 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 SLC25A4P12235 298 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 TBPP20226 339 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 CNR1P21554 472 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 Q0VFX4 171 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 TMEM105Q8N8V8 129 aa14.28□□□□□ -0.12
SLX4-202ENST00000466154 CER1O95813 267 aa14.27□□□□□ -0.12
SLX4-202ENST00000466154 CCL1P22362 96 aa14.27□□□□□ -0.12
SLX4-202ENST00000466154 FKBP2P26885 142 aaKnown RBP14.27□□□□□ -0.12
SLX4-202ENST00000466154 RBMXP38159 391 aaKnown RBP14.27□□□□□ -0.12
SLX4-202ENST00000466154 GSK3AP49840 483 aa14.27□□□□□ -0.12
SLX4-202ENST00000466154 SUPT4H1P63272 117 aaKnown RBP14.27□□□□□ -0.12
SLX4-202ENST00000466154 DCAF12Q5T6F0 453 aa14.27□□□□□ -0.12
SLX4-202ENST00000466154 TSPO2Q5TGU0 170 aa14.27□□□□□ -0.12
SLX4-202ENST00000466154 AADACL3Q5VUY0 350 aa14.27□□□□□ -0.12
SLX4-202ENST00000466154 OR5AP2Q8NGF4 316 aa14.27□□□□□ -0.12
SLX4-202ENST00000466154 PP6455Q8WZ26 134 aa14.27□□□□□ -0.12
SLX4-202ENST00000466154 ASPMQ8IZT6 3477 aa14.27□□□□□ -0.13
SLX4-202ENST00000466154 PPIAP62937 165 aaKnown RBP14.27□□□□□ -0.13
SLX4-202ENST00000466154 PAN3Q58A45 887 aaKnown RBP14.27□□□□□ -0.13
SLX4-202ENST00000466154 MOB3CQ70IA8 216 aa14.27□□□□□ -0.13
SLX4-202ENST00000466154 CPNE2Q96FN4 548 aaPredicted RBP14.27□□□□□ -0.13
SLX4-202ENST00000466154 LRRC46Q96FV0 321 aa14.27□□□□□ -0.13
SLX4-202ENST00000466154 PARP12Q9H0J9 701 aaKnown RBP14.27□□□□□ -0.13
SLX4-202ENST00000466154 TCFL5Q9UL49 500 aa14.27□□□□□ -0.13
SLX4-202ENST00000466154 LSM5Q9Y4Y9 91 aaKnown RBP14.27□□□□□ -0.13
SLX4-202ENST00000466154 ZNF407Q9C0G0 2248 aa14.27□□□□□ -0.13
SLX4-202ENST00000466154 HSPB6O14558 160 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 AGPAT2O15120 278 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 FPR2P25090 351 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 TAS2R46P59540 309 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 PNLIPRP3Q17RR3 467 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 PHLDA2Q53GA4 152 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 ACER2Q5QJU3 275 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 C10orf128Q5T292 105 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 SLC23A3Q6PIS1 610 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 PEG10Q86TG7 708 aaKnown RBP14.26□□□□□ -0.13
SLX4-202ENST00000466154 SULF2Q8IWU5 870 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 OCSTAMPQ9BR26 566 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 OR51B6Q9H340 312 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 DEPPQ9NTK1 212 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 LOXL2Q9Y4K0 774 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 FREM1Q5H8C1 2179 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 JMJD7P0C870 316 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 PRF1P14222 555 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 RAC3P60763 192 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 RIPPLY1Q0D2K3 151 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 ACTBL2Q562R1 376 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 VAX1Q5SQQ9 334 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 OR1F12Q8NHA8 337 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 ASB13Q8WXK3 278 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 CMSS1Q9BQ75 279 aaKnown RBP14.26□□□□□ -0.13
SLX4-202ENST00000466154 RNF126Q9BV68 326 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 HES7Q9BYE0 225 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 METTL9Q9H1A3 318 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 PINLYPA6NC86 204 aa14.26□□□□□ -0.13
SLX4-202ENST00000466154 GJE1A6NN92 205 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms