RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 DUPD1Q68J44 220 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 DEGS2Q6QHC5 323 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 OR4A15Q8NGL6 344 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 OR13C9Q8NGT0 318 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 OR51A7Q8NH64 312 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 ZFAND1Q8TCF1 268 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 CIDECQ96AQ7 238 aaPredicted RBP2.23□□□□□ -2.05
CLK1-208ENST00000464454 S100PBPQ96BU1 408 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 WDR34Q96EX3 536 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 CENPNQ96H22 339 aaPredicted RBP2.23□□□□□ -2.05
CLK1-208ENST00000464454 RNF170Q96K19 258 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 C1orf50Q9BV19 199 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 TM6SF2Q9BZW4 377 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 IL37Q9NZH6 218 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 PPIL1Q9Y3C6 166 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 WIF1Q9Y5W5 379 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 BZW2Q9Y6E2 419 aaKnown RBP2.23□□□□□ -2.05
CLK1-208ENST00000464454 BAZ2AQ9UIF9 1905 aaKnown RBP2.23□□□□□ -2.05
CLK1-208ENST00000464454 SVILO95425 2214 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 IGKV1D-17A0A075B6S4 117 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 IGHV6-1A0A0B4J1U7 121 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 GSTTP1A0A1W2PQM5 241 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 ANKRD20A5PA0PJZ0 165 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 J3QT63 122 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 OR7C2O60412 319 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 GMDSO60547 372 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 CD5P06127 495 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 OR5AL1P0C617 328 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 PTNP21246 168 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 RPL31P62899 125 aaKnown RBP2.22□□□□□ -2.05
CLK1-208ENST00000464454 IFFO1Q0D2I5 559 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 TRDNQ13061 729 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 MAD2L1BPQ15013 274 aaPredicted RBP2.22□□□□□ -2.05
CLK1-208ENST00000464454 MED27Q6P2C8 311 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 FAM58AQ8N1B3 248 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 STK40Q8N2I9 435 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 RNF10Q8N5U6 811 aaKnown RBP2.22□□□□□ -2.05
CLK1-208ENST00000464454 ASCC1Q8N9N2 400 aaKnown RBP2.22□□□□□ -2.05
CLK1-208ENST00000464454 CYB561A3Q8NBI2 242 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 ZFP3Q96NJ6 502 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 RHOXF2Q9BQY4 288 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 CHID1Q9BWS9 393 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 TBL1XR1Q9BZK7 514 aa2.22□□□□□ -2.05
CLK1-208ENST00000464454 IGHV3OR16-8A0A075B7F1 116 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 LOC102724200A0A096LPH7 203 aaPredicted RBP2.21□□□□□ -2.06
CLK1-208ENST00000464454 A0A0G2JMP0 313 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 A0A0X1KG70 313 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 SEC14L6B5MCN3 397 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 PRAMEF26H0Y7S4 382 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 NDUFS5O43920 106 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 CSTAP01040 98 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 IGKV1-17P01599 117 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 RHOCP08134 193 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 MPIP34949 423 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 ARR3P36575 388 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 GALR1P47211 349 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 IDH2P48735 452 aaKnown RBP2.21□□□□□ -2.06
CLK1-208ENST00000464454 PSMB2P49721 201 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 CARD18P57730 90 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 MLF1P58340 268 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 ELF3P78545 371 aaPredicted RBP2.21□□□□□ -2.06
CLK1-208ENST00000464454 ADIGQ0VDE8 80 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 FBXL19-AS1Q494R0 122 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 TTC32Q5I0X7 151 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 FAM27D1Q5T7N8 215 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 MORN3Q6PF18 240 aaPredicted RBP2.21□□□□□ -2.06
CLK1-208ENST00000464454 C16orf87Q6PH81 154 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 CASP12Q6UXS9 341 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 ZCCHC24Q8N2G6 241 aaKnown RBP2.21□□□□□ -2.06
CLK1-208ENST00000464454 OR52N1Q8NH53 320 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 NDNFQ8TB73 568 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 KLF14Q8TD94 323 aaPredicted RBP2.21□□□□□ -2.06
CLK1-208ENST00000464454 RAB22AQ9UL26 194 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 TFR2Q9UP52 801 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 SLC7A11Q9UPY5 501 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 ENPP4Q9Y6X5 453 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 V9GYY9 64 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 TRIP11Q15643 1979 aa2.21□□□□□ -2.06
CLK1-208ENST00000464454 KIAA1671Q9BY89 1806 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 MFNGO00587 321 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 ALOX12BO75342 701 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 CD28P10747 220 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 PAX6P26367 422 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 HTR2CP28335 458 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 NUP62P37198 522 aaPredicted RBP2.2□□□□□ -2.06
CLK1-208ENST00000464454 GRB2P62993 217 aaKnown RBP2.2□□□□□ -2.06
CLK1-208ENST00000464454 LAMTOR4Q0VGL1 99 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 CDNFQ49AH0 187 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 SLC25A25Q6KCM7 469 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 EPGNQ6UW88 154 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 BBS7Q8IWZ6 715 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 OR2M7Q8NG81 312 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 OR6N2Q8NGY6 317 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 HGDQ93099 445 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 PDCD1LG2Q9BQ51 273 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 MAP1LC3CQ9BXW4 147 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 CHRNA10Q9GZZ6 450 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 VCX3AQ9NNX9 186 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 RAB23Q9ULC3 237 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms