RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 OR4M1Q8NGD0 313 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 OR13D1Q8NGV5 346 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 OR6K6Q8NGW6 343 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 RP9Q8TA86 221 aaKnown RBP11.64□□□□□ -0.55
SMC1A-204ENST00000463684 EGLN3Q9H6Z9 239 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 RASL12Q9NYN1 266 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 ZNF319Q9P2F9 582 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 GYPBP06028 91 aa11.63□□□□□ -0.55
SMC1A-204ENST00000463684 H2BFMP0C1H6 154 aa11.63□□□□□ -0.55
SMC1A-204ENST00000463684 CCL3L1P16619 93 aa11.63□□□□□ -0.55
SMC1A-204ENST00000463684 GNG3P63215 75 aa11.63□□□□□ -0.55
SMC1A-204ENST00000463684 SF3A3Q12874 501 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMC1A-204ENST00000463684 GLYATQ6IB77 296 aa11.63□□□□□ -0.55
SMC1A-204ENST00000463684 PIGWQ7Z7B1 504 aa11.63□□□□□ -0.55
SMC1A-204ENST00000463684 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.63□□□□□ -0.55
SMC1A-204ENST00000463684 ZNF561Q8N587 486 aa11.63□□□□□ -0.55
SMC1A-204ENST00000463684 ABHD6Q9BV23 337 aa11.63□□□□□ -0.55
SMC1A-204ENST00000463684 INPP5EQ9NRR6 644 aa11.63□□□□□ -0.55
SMC1A-204ENST00000463684 DCAF13Q9NV06 445 aaKnown RBP11.63□□□□□ -0.55
SMC1A-204ENST00000463684 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.63□□□□□ -0.55
SMC1A-204ENST00000463684 RFPL4AA6NLU0 287 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 HMGB1P1B2RPK0 211 aaPredicted RBP11.62□□□□□ -0.55
SMC1A-204ENST00000463684 ZNF732B4DXR9 585 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 RFPL4AL1F8VTS6 287 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 SLC22A2O15244 555 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 ACKR3P25106 362 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 AZGP1P25311 298 aaKnown RBP11.62□□□□□ -0.55
SMC1A-204ENST00000463684 NUDT2P50583 147 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 DYNLT3P51808 116 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 DYNC1I2Q13409 638 aaKnown RBP11.62□□□□□ -0.55
SMC1A-204ENST00000463684 KLHL22Q53GT1 634 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 RNF144BQ7Z419 303 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 OR4X2Q8NGF9 303 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 RNF133Q8WVZ7 376 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 HPSE2Q8WWQ2 592 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 MYDGFQ969H8 173 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 CHID1Q9BWS9 393 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 FGF23Q9GZV9 251 aaPredicted RBP11.62□□□□□ -0.55
SMC1A-204ENST00000463684 OR51I2Q9H344 312 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 EFCAB1Q9HAE3 211 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 ZMAT5Q9UDW3 170 aaKnown RBP11.62□□□□□ -0.55
SMC1A-204ENST00000463684 CDH10Q9Y6N8 788 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 U3KQK5 164 aa11.62□□□□□ -0.55
SMC1A-204ENST00000463684 C3orf84H3BNL1 204 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 MTRF1O75570 445 aaKnown RBP11.61□□□□□ -0.55
SMC1A-204ENST00000463684 SPI1P17947 270 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 PRDX2P32119 198 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 COL10A1Q03692 680 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 SLC34A1Q06495 639 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 CRMP1Q14194 572 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 SMIM21Q3B7S5 101 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 TCTEX1D4Q5JR98 221 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 KHDC1LQ5JSQ8 128 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 UNQ9370/PRO34162Q6UXP9 181 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 ERI1Q8IV48 349 aaKnown RBP11.61□□□□□ -0.55
SMC1A-204ENST00000463684 CD177Q8N6Q3 437 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 OR6N2Q8NGY6 317 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 FAM81AQ8TBF8 368 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 CAPSLQ8WWF8 208 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 AQP3Q92482 292 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 MCUR1Q96AQ8 359 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 HILPDAQ9Y5L2 63 aa11.61□□□□□ -0.55
SMC1A-204ENST00000463684 C17orf98A8MV24 154 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 ODF3BA8MYP8 253 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 CLUP10909 449 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 COX4I1P13073 169 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 RRM2P31350 389 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 OPRL1P41146 370 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 ZNF273Q14593 569 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 CEACAM21Q3KPI0 293 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 CEP78Q5JTW2 689 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 ZNF626Q68DY1 528 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 LCN8Q6JVE9 175 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 ACP7Q6ZNF0 438 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 SHFQ7M4L6 423 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 OR11H6Q8NGC7 330 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 OR5A2Q8NGI9 324 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 PYURFQ96I23 114 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 AKR1E2Q96JD6 320 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 INTS14Q96SY0 518 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 MCRIP2Q9BUT9 160 aaKnown RBP11.6□□□□□ -0.55
SMC1A-204ENST00000463684 NMNAT2Q9BZQ4 307 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 TBC1D23Q9NUY8 699 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 IL20Q9NYY1 176 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 V9GYQ6 96 aa11.6□□□□□ -0.55
SMC1A-204ENST00000463684 CHRM2P08172 466 aa11.59□□□□□ -0.55
SMC1A-204ENST00000463684 PIPP12273 146 aaPredicted RBP11.59□□□□□ -0.55
SMC1A-204ENST00000463684 LMO1P25800 156 aa11.59□□□□□ -0.55
SMC1A-204ENST00000463684 MAP2K3P46734 347 aa11.59□□□□□ -0.55
SMC1A-204ENST00000463684 SAMD4BQ5PRF9 694 aaKnown RBP11.59□□□□□ -0.55
SMC1A-204ENST00000463684 ZNF770Q6IQ21 691 aaPredicted RBP11.59□□□□□ -0.55
SMC1A-204ENST00000463684 C8orf82Q6P1X6 216 aaPredicted RBP11.59□□□□□ -0.55
SMC1A-204ENST00000463684 HAGHLQ6PII5 290 aaPredicted RBP11.59□□□□□ -0.55
SMC1A-204ENST00000463684 LINC00471Q8N535 108 aa11.59□□□□□ -0.55
SMC1A-204ENST00000463684 LINC00482Q8N8I6 264 aa11.59□□□□□ -0.55
SMC1A-204ENST00000463684 OR51D1Q8NGF3 324 aa11.59□□□□□ -0.55
SMC1A-204ENST00000463684 LYZL4Q96KX0 146 aa11.59□□□□□ -0.55
SMC1A-204ENST00000463684 TSSK6Q9BXA6 273 aa11.59□□□□□ -0.55
SMC1A-204ENST00000463684 VIPAS39Q9H9C1 493 aa11.59□□□□□ -0.55
SMC1A-204ENST00000463684 BAIAP2Q9UQB8 552 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms