RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ANKRD61A6NGH8 418 aa14.74□□□□□ -0.05
VPS52-214ENST00000463486 H0YHG0 523 aa14.74□□□□□ -0.05
VPS52-214ENST00000463486 PHF1O43189 567 aaPredicted RBP14.74□□□□□ -0.05
VPS52-214ENST00000463486 CHRFAM7AQ494W8 412 aa14.74□□□□□ -0.05
VPS52-214ENST00000463486 C10orf35Q96D05 121 aa14.74□□□□□ -0.05
VPS52-214ENST00000463486 NEIL1Q96FI4 390 aaPredicted RBP14.74□□□□□ -0.05
VPS52-214ENST00000463486 MYCBPQ99417 103 aaPredicted RBP14.74□□□□□ -0.05
VPS52-214ENST00000463486 CHST5Q9GZS9 411 aa14.74□□□□□ -0.05
VPS52-214ENST00000463486 CNOT2Q9NZN8 540 aaKnown RBP14.74□□□□□ -0.05
VPS52-214ENST00000463486 OPN4Q9UHM6 478 aa14.74□□□□□ -0.05
VPS52-214ENST00000463486 LRCH1Q9Y2L9 728 aa14.74□□□□□ -0.05
VPS52-214ENST00000463486 IGKV1-27A0A075B6S5 117 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 IGHV3OR15-7A0A075B7D8 119 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 TRAV38-1A0A0B4J264 116 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 IGKV1-9A0A0C4DH69 117 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 EFCAB10A6NFE3 127 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 FOXH1O75593 365 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 RPS2P15880 293 aaKnown RBP14.73□□□□□ -0.05
VPS52-214ENST00000463486 MPZP25189 248 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 C21orf33P30042 268 aaPredicted RBP14.73□□□□□ -0.05
VPS52-214ENST00000463486 MRPL28Q13084 256 aaKnown RBP14.73□□□□□ -0.05
VPS52-214ENST00000463486 C6orf141Q5SZD1 244 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 KCTD8Q6ZWB6 473 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 BPIFB6Q8NFQ5 453 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 RGP1Q92546 391 aaPredicted RBP14.73□□□□□ -0.05
VPS52-214ENST00000463486 BEX2Q9BXY8 128 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 ANKRD60Q9BZ19 345 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 SHARPINQ9H0F6 387 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 BABAM2Q9NXR7 383 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 ERVK-18Q9QC07 812 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 KAAG1Q9UBP8 84 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 LPAR3Q9UBY5 353 aa14.73□□□□□ -0.05
VPS52-214ENST00000463486 EXOSC1Q9Y3B2 195 aaKnown RBP14.73□□□□□ -0.05
VPS52-214ENST00000463486 FBN1P35555 2871 aaKnown RBP14.73□□□□□ -0.05
VPS52-214ENST00000463486 A0A1B0GW55 424 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 OGG1O15527 345 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 AKR7A2O43488 359 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 NDUFA2O43678 99 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 GYPAP02724 150 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 DUX4L2P0CJ85 424 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 DUX4L3P0CJ86 424 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 DUX4L4P0CJ87 422 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 DUX4L5P0CJ88 424 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 DUX4L6P0CJ89 424 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 DUX4L7P0CJ90 424 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 MUC1P15941 1255 aaPredicted RBP14.72□□□□□ -0.05
VPS52-214ENST00000463486 ZNF12P17014 697 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 MYF6P23409 242 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 GBX2P52951 348 aaPredicted RBP14.72□□□□□ -0.05
VPS52-214ENST00000463486 CCDC58Q4VC31 144 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 ATPAF1Q5TC12 328 aaPredicted RBP14.72□□□□□ -0.05
VPS52-214ENST00000463486 WDR25Q64LD2 544 aaPredicted RBP14.72□□□□□ -0.05
VPS52-214ENST00000463486 STUMQ69YW2 141 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 FAHD2BQ6P2I3 314 aaPredicted RBP14.72□□□□□ -0.05
VPS52-214ENST00000463486 HAGHLQ6PII5 290 aaPredicted RBP14.72□□□□□ -0.05
VPS52-214ENST00000463486 DUX4L9Q6RFH8 374 aaPredicted RBP14.72□□□□□ -0.05
VPS52-214ENST00000463486 CALHM1Q8IU99 346 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 FGGYQ96C11 551 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 FAHD2AQ96GK7 314 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 PDCD1LG2Q9BQ51 273 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 SMURF1Q9HCE7 757 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 TRIM36Q9NQ86 728 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 DUX4Q9UBX2 424 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 HHLA2Q9UM44 414 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 DOCK11Q5JSL3 2073 aa14.72□□□□□ -0.05
VPS52-214ENST00000463486 SYNGR1O43759 233 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 NOS1APO75052 506 aaPredicted RBP14.71□□□□□ -0.05
VPS52-214ENST00000463486 FAM157CP0CG43 387 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 PITPNBP48739 271 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 KRTAP21-3Q3LHN1 58 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 ESCO2Q56NI9 601 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 RPL22L1Q6P5R6 122 aaKnown RBP14.71□□□□□ -0.05
VPS52-214ENST00000463486 CRIP3Q6Q6R5 217 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 IZUMO2Q6UXV1 221 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 UTS2BQ765I0 119 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 ZNF676Q8N7Q3 588 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 OR52N1Q8NH53 320 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 ANGPTL6Q8NI99 470 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 HAVCR2Q8TDQ0 301 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 PP6455Q8WZ26 134 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 SGCDQ92629 289 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 C12orf43Q96C57 262 aaKnown RBP14.71□□□□□ -0.05
VPS52-214ENST00000463486 SSBP3Q9BWW4 388 aaPredicted RBP14.71□□□□□ -0.05
VPS52-214ENST00000463486 RASSF4Q9H2L5 321 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 PAK1IP1Q9NWT1 392 aaPredicted RBP14.71□□□□□ -0.05
VPS52-214ENST00000463486 PCDHGB5Q9Y5G0 923 aa14.71□□□□□ -0.05
VPS52-214ENST00000463486 COL6A5A8TX70 2615 aa14.71□□□□□ -0.06
VPS52-214ENST00000463486 A0A0G2JMP0 313 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 A0A0X1KG70 313 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 TMEM212A6NML5 194 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 ACAA1P09110 424 aaPredicted RBP14.7□□□□□ -0.06
VPS52-214ENST00000463486 CCDC159P0C7I6 412 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 PGA5P0DJD9 388 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 PCMT1P22061 227 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 GATA3P23771 443 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 HAAOP46952 286 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 ERVK11-1P61568 191 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 CDK5R1Q15078 307 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 KCNJ8Q15842 424 aa14.7□□□□□ -0.06
VPS52-214ENST00000463486 MICBQ29980 383 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms