RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TBX15Q96SF7 602 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF649Q9BS31 505 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 PAPOLGQ9BWT3 736 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 MMP27Q9H306 513 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 FN3KRPQ9HA64 309 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 GPR84Q9NQS5 396 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 TNFRSF19Q9NS68 423 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 ACOXLQ9NUZ1 547 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 C1orf123Q9NWV4 160 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 RNF7Q9UBF6 113 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 CTSZQ9UBR2 303 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF391Q9UJN7 358 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR52A1Q9UKL2 312 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 SLC22A13Q9Y226 551 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 EXOGQ9Y2C4 368 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF816-ZNF321PA0A0X1KG74 233 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 CLPSL1A2RUU4 121 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 METTL15A6NJ78 407 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 LRRC30A6NM36 301 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF850A8MQ14 1090 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 LGALS8O00214 317 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 P2RY10O00398 339 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 CASQ2O14958 399 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 WBP4O75554 376 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 SULT1C4O75897 302 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 DHRS3O75911 302 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 TSPAN15O95858 294 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 GRPP07492 148 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 DBTP11182 482 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 ATP6V1B1P15313 513 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 FAHP16930 419 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 CFHR2P36980 270 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 KIR3DL2P43630 455 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 ELF3P78545 371 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 LRRC36Q1X8D7 754 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 CDONQ4KMG0 1287 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 TP53I3Q53FA7 332 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 FAM76BQ5HYJ3 339 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 WDR38Q5JTN6 314 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 OGFRL1Q5TC84 451 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF691Q5VV52 312 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 MEDAGQ5VYS4 303 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 TMEM42Q69YG0 159 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 ASPHD2Q6ICH7 369 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 WDR82Q6UXN9 313 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 C17orf107Q6ZR85 190 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 DCDC5Q6ZRR9 648 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 C1orf87Q8N0U7 546 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 GALNT4Q8N4A0 578 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 YIPF7Q8N8F6 280 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR11L1Q8NGX0 322 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR14K1Q8NGZ2 314 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR8S1Q8NH09 359 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 FAM71F1Q96KD3 344 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 BEX1Q9HBH7 125 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 NOX4Q9NPH5 578 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 SMPD3Q9NY59 655 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 CLN8Q9UBY8 286 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 MPC1Q9Y5U8 109 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 SNX5Q9Y5X3 404 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 V9GYS6 101 aa6.54□□□□□ -1.36
CDC42BPA-210ENST00000462553 CENPVL3A0A0U1RRI6 287 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 A0A1B0GW55 424 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 OOEPA6NGQ2 149 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 A6NLC8 198 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 TMEM210A6NLX4 147 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 ENSAO43768 121 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 CLPXO76031 633 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 RPP14O95059 124 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 CLIC3O95833 236 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 KRT8P05787 483 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 DUX4L2P0CJ85 424 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 DUX4L3P0CJ86 424 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 DUX4L4P0CJ87 422 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 DUX4L5P0CJ88 424 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 DUX4L6P0CJ89 424 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 DUX4L7P0CJ90 424 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 IRF2P14316 349 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 GNALP38405 381 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 MAP2K3P46734 347 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 PROK1P58294 105 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 BPIFB3P59826 476 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 ACTC1P68032 377 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 ACTA1P68133 377 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 ADARB1P78563 741 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 IL5RAQ01344 420 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 SNCBQ16143 134 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 SMN1Q16637 294 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 DMRTC1Q5HYR2 192 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 CEP78Q5JTW2 689 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 BCL2L15Q5TBC7 163 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZBTB37Q5TC79 503 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 GPR157Q5UAW9 335 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 TEX36Q5VZQ5 186 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 SFRP4Q6FHJ7 346 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 DUX4L9Q6RFH8 374 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 NLRC3Q7RTR2 1065 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 FAM90A1Q86YD7 464 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms