RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CBY3A6NI87 242 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 CA11O75493 328 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 KDM4BO94953 1096 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 ZNF823P16415 610 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 APEX1P27695 318 aaKnown RBP9.13□□□□□ -0.95
HERC4-207ENST00000460168 SLC17A1Q14916 467 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 SLC10A1Q14973 349 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 SURF2Q15527 256 aaPredicted RBP9.13□□□□□ -0.95
HERC4-207ENST00000460168 C22orf42Q6IC83 251 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 S100A7AQ86SG5 101 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 BIVMQ86UB2 503 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 BHLHE23Q8NDY6 225 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 OR9K2Q8NGE7 335 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 OR52N4Q8NGI2 321 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 ADGRG7Q96K78 797 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 SNHG12Q9BXW3 62 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 C11orf54Q9H0W9 315 aaPredicted RBP9.13□□□□□ -0.95
HERC4-207ENST00000460168 MRPL22Q9NWU5 206 aaKnown RBP9.13□□□□□ -0.95
HERC4-207ENST00000460168 GSTK1Q9Y2Q3 226 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 KLHDC2Q9Y2U9 406 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 SIRT4Q9Y6E7 314 aaPredicted RBP9.13□□□□□ -0.95
HERC4-207ENST00000460168 M0R143 59 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 PLPP2O43688 288 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 ORC5O43913 435 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 SOX15O60248 233 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 MPZL1O95297 269 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 RPLP1P05386 114 aaKnown RBP9.13□□□□□ -0.95
HERC4-207ENST00000460168 TACSTD2P09758 323 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 RCC1P18754 421 aaPredicted RBP9.13□□□□□ -0.95
HERC4-207ENST00000460168 ALOX5APP20292 161 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 LHX2P50458 406 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 CLDN15P56746 228 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 SIRPAP78324 504 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 FABP5Q01469 135 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 PDZK1IP1Q13113 114 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 HYAL4Q2M3T9 481 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 CDPF1Q6NVV7 123 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 IGFL2Q6UWQ7 119 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 GLB1L2Q8IW92 636 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 SLC26A10Q8NG04 563 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 DPF1Q92782 380 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 KCTD7Q96MP8 289 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 BARHL1Q9BZE3 327 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.13□□□□□ -0.951e-6■□□□□ 10.3
HERC4-207ENST00000460168 FBXO7Q9Y3I1 522 aa9.13□□□□□ -0.95
HERC4-207ENST00000460168 ELOA3CA0A087WX78 387 aaPredicted RBP9.12□□□□□ -0.95
HERC4-207ENST00000460168 TRBV2A0A0J9YWF9 115 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 COLCA2A8K830 154 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 SERPINE3A8MV23 424 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 DISC1C4P0D8 188 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 GABRPO00591 440 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 TCF21O43680 179 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 ANXA3P12429 323 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 EDNRAP25101 427 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 PSMB10P40306 273 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 GAMTQ14353 236 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 SLC18B1Q6NT16 456 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 CD200R1LQ6Q8B3 271 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 ASB18Q6ZVZ8 466 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 CATSPERDQ86XM0 798 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 OR6N1Q8NGY5 312 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 OR5R1Q8NH85 324 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 OR1S1Q8NH92 325 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 ZNF775Q96BV0 537 aaPredicted RBP9.12□□□□□ -0.95
HERC4-207ENST00000460168 TSNAXQ99598 290 aaKnown RBP9.12□□□□□ -0.95
HERC4-207ENST00000460168 MARVELD1Q9BSK0 173 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 SEC61A2Q9H9S3 476 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 CACNA1CQ13936 2221 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 DNAJC13O75165 2243 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 ZNF407Q9C0G0 2248 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 TRAV17A0A0B4J275 112 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 TRDV1A0A1B0GX56 115 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 CD8B2A6NJW9 211 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 PRR32B1ATL7 298 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 ITGB2P05107 769 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 CD8BP10966 210 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 FGF9P31371 208 aaPredicted RBP9.12□□□□□ -0.95
HERC4-207ENST00000460168 CSNK1A1P48729 337 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 CLDN18P56856 261 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 MXD1Q05195 221 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 INSL4Q14641 139 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 ARL6IP1Q15041 203 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 CDK5R1Q15078 307 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 DMKNQ6E0U4 476 aaPredicted RBP9.12□□□□□ -0.95
HERC4-207ENST00000460168 RPL22L1Q6P5R6 122 aaKnown RBP9.12□□□□□ -0.95
HERC4-207ENST00000460168 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 LRRC28Q86X40 367 aaPredicted RBP9.12□□□□□ -0.95
HERC4-207ENST00000460168 PDZD9Q8IXQ8 264 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 HSD17B8Q92506 261 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 GHSRQ92847 366 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 MCHR2Q969V1 340 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 SMIM19Q96E16 107 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 CPNE2Q96FN4 548 aaPredicted RBP9.12□□□□□ -0.95
HERC4-207ENST00000460168 DEFB127Q9H1M4 99 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 SMURF1Q9HCE7 757 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 ACKR4Q9NPB9 350 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 RCC2Q9P258 522 aaKnown RBP9.12□□□□□ -0.95
HERC4-207ENST00000460168 SMPXQ9UHP9 88 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 OR52A1Q9UKL2 312 aa9.12□□□□□ -0.95
HERC4-207ENST00000460168 CEP295Q9C0D2 2601 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms