RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MC5RP33032 325 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 HIST1H3AP68431 136 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 EGR3Q06889 387 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 SPOCK1Q08629 439 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 MLLT11Q13015 90 aaPredicted RBP8.95□□□□□ -0.98
USP39-210ENST00000459775 HSPB2Q16082 182 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 WDR38Q5JTN6 314 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 ELFN2Q5R3F8 820 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 HIST2H3PS2Q5TEC6 136 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 HIST2H2BCQ6DN03 193 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 KCTD18Q6PI47 426 aaPredicted RBP8.95□□□□□ -0.98
USP39-210ENST00000459775 HIST2H3AQ71DI3 136 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 ZNF627Q7L945 461 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 ZNF573Q86YE8 665 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.95□□□□□ -0.98
USP39-210ENST00000459775 SYS1Q8N2H4 156 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 PAQR4Q8N4S7 273 aaPredicted RBP8.95□□□□□ -0.98
USP39-210ENST00000459775 OR5H6Q8NGV6 325 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 CORO2AQ92828 525 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 GHSRQ92847 366 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 S100PBPQ96BU1 408 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 MARS2Q96GW9 593 aaKnown RBP8.95□□□□□ -0.98
USP39-210ENST00000459775 ZFP3Q96NJ6 502 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 HDHD5Q9BXW7 423 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 B3GNT2Q9NY97 397 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 TIMM10BQ9Y5J6 103 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 TEX15Q9BXT5 2789 aa8.95□□□□□ -0.98
USP39-210ENST00000459775 TRBV23-1A0A0A0MS06 115 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 TRBV2A0A0J9YWF9 115 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 TMEM269A0A1B0GVZ9 245 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 ANKRD61A6NGH8 418 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 SRSF10O75494 262 aaKnown RBP8.94□□□□□ -0.98
USP39-210ENST00000459775 IFNA4P05014 189 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 HTR5AP47898 357 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 DEFA6Q01524 100 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 RIPPLY1Q0D2K3 151 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 SNTB2Q13425 540 aaKnown RBP8.94□□□□□ -0.98
USP39-210ENST00000459775 FAM27D1Q5T7N8 215 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 FAM220AQ7Z4H9 259 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 ABHD12BQ7Z5M8 362 aaPredicted RBP8.94□□□□□ -0.98
USP39-210ENST00000459775 ZNF561Q8N587 486 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 OR51A4Q8NGJ6 313 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 OR2G2Q8NGZ5 317 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 ASB17Q8WXJ9 295 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 RGP1Q92546 391 aaPredicted RBP8.94□□□□□ -0.98
USP39-210ENST00000459775 FCGR1BQ92637 280 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 ATF6BQ99941 703 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 PPIL3Q9H2H8 161 aaKnown RBP8.94□□□□□ -0.98
USP39-210ENST00000459775 RGCCQ9H4X1 137 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 TRIM36Q9NQ86 728 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 HIF1ANQ9NWT6 349 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 ZNF629Q9UEG4 869 aaPredicted RBP8.94□□□□□ -0.98
USP39-210ENST00000459775 KCNK7Q9Y2U2 307 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 ZNF281Q9Y2X9 895 aa8.94□□□□□ -0.98
USP39-210ENST00000459775 WIPF3A6NGB9 483 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 A6NIN4 97 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 ZNF878C9JN71 531 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 F8WDY8 70 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 LMX1BO60663 402 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 CLEC2LP0C7M8 214 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 NDUFB7P17568 137 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 IDH3GP51553 393 aaPredicted RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 ZNF121P58317 390 aaPredicted RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 NCS1P62166 190 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 TPBGQ13641 420 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 KRTAP21-3Q3LHN1 58 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 DMKNQ6E0U4 476 aaPredicted RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 FAM57BQ71RH2 274 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 OR1F12Q8NHA8 337 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 CA5BP1Q8WTZ4 195 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 ZC3HAV1LQ96H79 300 aaKnown RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 PGLYRP3Q96LB9 341 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 PACRGQ96M98 296 aaPredicted RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 ZNF75AQ96N20 296 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 CITED1Q99966 193 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 RBM38Q9H0Z9 239 aaKnown RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 MRPL15Q9P015 296 aaKnown RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 SF3B6Q9Y3B4 125 aaKnown RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 UTP20O75691 2785 aaKnown RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 M0QZK8 103 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 MSTNO14793 375 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 ZG16O60844 167 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 TACSTD2P09758 323 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 SLC6A9P48067 706 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 CX3CR1P49238 355 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 FABP5Q01469 135 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 TGFBR3Q03167 851 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 CDK5R1Q15078 307 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 GSG1Q2KHT4 349 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 SNAI3Q3KNW1 292 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 SLC36A2Q495M3 483 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 DMRTC1Q5HYR2 192 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 ZNF787Q6DD87 383 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 ZNF283Q8N7M2 679 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 CLRN3Q8NCR9 226 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 OR10A7Q8NGE5 316 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 G6PC2Q9NQR9 355 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 FAM206AQ9NX38 181 aa8.93□□□□□ -0.98
USP39-210ENST00000459775 EIF3KQ9UBQ5 218 aaKnown RBP8.93□□□□□ -0.98
USP39-210ENST00000459775 ESPL1Q14674 2120 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms