RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 SELLP14151 372 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 MUC1P15941 1255 aaPredicted RBP15.53■□□□□ 0.08
USP39-209ENST00000458268 HAAOP46952 286 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 NPY4RP50391 375 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 FGF12P61328 243 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 SMN1Q16637 294 aaKnown RBP15.53■□□□□ 0.08
USP39-209ENST00000458268 CDONQ4KMG0 1287 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 SLC36A1Q7Z2H8 476 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 OR10Z1Q8NGY1 313 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 CNIH3Q8TBE1 160 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 APH1BQ8WW43 257 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 TMIGD2Q96BF3 282 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 PCGF1Q9BSM1 259 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 OR51I2Q9H344 312 aa15.53■□□□□ 0.08
USP39-209ENST00000458268 EXOGQ9Y2C4 368 aaKnown RBP15.53■□□□□ 0.08
USP39-209ENST00000458268 ANKRD61A6NGH8 418 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 NDUFB3O43676 98 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 SYNGR1O43759 233 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 UBCP0CG48 685 aaKnown RBP15.52■□□□□ 0.08
USP39-209ENST00000458268 ZNF20P17024 532 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 CPT2P23786 658 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 ACTA2P62736 377 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 ACTG2P63267 376 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 CD276Q5ZPR3 534 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 BTN2A1Q7KYR7 527 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 OR2G2Q8NGZ5 317 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 ZNF671Q8TAW3 534 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 AQP3Q92482 292 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 RDH12Q96NR8 316 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 NLKQ9UBE8 527 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 SLC7A11Q9UPY5 501 aa15.52■□□□□ 0.08
USP39-209ENST00000458268 RPL36Q9Y3U8 105 aaKnown RBP15.52■□□□□ 0.08
USP39-209ENST00000458268 KIR2DS1A0A191URI9 304 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 J3QRE1 110 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 DLGAP1O14490 977 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 VENTXO95231 258 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 OCM2P0CE71 109 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 OCMP0CE72 109 aaPredicted RBP15.51■□□□□ 0.07
USP39-209ENST00000458268 IGHV4-38-2P0DP08 117 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 FPR2P25090 351 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 CAPZA1P52907 286 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 NANOS3P60323 173 aaKnown RBP15.51■□□□□ 0.07
USP39-209ENST00000458268 PAX2Q02962 417 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 PAX8Q06710 450 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 ANGPTL5Q86XS5 388 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 DHRSXQ8N5I4 330 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 ZNF676Q8N7Q3 588 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 OR52I1Q8NGK6 324 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 C19orf24Q9BVV8 132 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 MS4A7Q9GZW8 240 aaPredicted RBP15.51■□□□□ 0.07
USP39-209ENST00000458268 ISG20L2Q9H9L3 353 aaKnown RBP15.51■□□□□ 0.07
USP39-209ENST00000458268 ONECUT1Q9UBC0 465 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 ZNF69Q9UC07 566 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 NUP50Q9UKX7 468 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 MXRA5Q9NR99 2828 aa15.51■□□□□ 0.07
USP39-209ENST00000458268 OR2AT4A6NND4 320 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 NDUFB7P17568 137 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 CCL1P22362 96 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 RAB40BQ12829 278 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 GALEQ14376 348 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 KLHL22Q53GT1 634 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 LRRC10Q5BKY1 277 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 KLF17Q5JT82 389 aaPredicted RBP15.5■□□□□ 0.07
USP39-209ENST00000458268 ZNF691Q5VV52 312 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 TMEM244Q5VVB8 128 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 TTC23Q5W5X9 447 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 STUMQ69YW2 141 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 KCTD20Q7Z5Y7 419 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 ZNF573Q86YE8 665 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 BCL6BQ8N143 479 aaPredicted RBP15.5■□□□□ 0.07
USP39-209ENST00000458268 TMEM185AQ8NFB2 350 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 PELI1Q96FA3 418 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 SUCNR1Q9BXA5 334 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 ERVK13-1Q9NX77 482 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 FRRS1LQ9P0K9 344 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 OR14J1Q9UGF5 321 aa15.5■□□□□ 0.07
USP39-209ENST00000458268 PQLC2LA1A4F0 135 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 J3QT63 122 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 TNFRSF13BO14836 293 aaPredicted RBP15.49■□□□□ 0.07
USP39-209ENST00000458268 FCN3O75636 299 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 GATBO75879 557 aaKnown RBP15.49■□□□□ 0.07
USP39-209ENST00000458268 NXPH2O95156 264 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 SERPINA3P01011 423 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 SFTPBP07988 381 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 CFHR2P36980 270 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 CEBPDP49716 269 aaPredicted RBP15.49■□□□□ 0.07
USP39-209ENST00000458268 ISL1P61371 349 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 ARF6P62330 175 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 GABPB1Q06547 395 aaPredicted RBP15.49■□□□□ 0.07
USP39-209ENST00000458268 FAM76BQ5HYJ3 339 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 TMEM42Q69YG0 159 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 RBMS3Q6XE24 437 aaKnown RBP15.49■□□□□ 0.07
USP39-209ENST00000458268 PDZD9Q8IXQ8 264 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 PACRGLQ8N7B6 248 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 SIGLECL1Q8N7X8 197 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 PNLDC1Q8NA58 520 aaKnown RBP15.49■□□□□ 0.07
USP39-209ENST00000458268 OR13C3Q8NGS6 347 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 OR10AC1Q8NH08 325 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 FGGYQ96C11 551 aa15.49■□□□□ 0.07
USP39-209ENST00000458268 BORCS8Q96FH0 119 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms