RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 TSPAN31Q12999 210 aa18.64■□□□□ 0.57
PTPRA-208ENST00000455631 GNPDA2Q8TDQ7 276 aa18.64■□□□□ 0.57
PTPRA-208ENST00000455631 HIST1H2AAQ96QV6 131 aa18.64■□□□□ 0.57
PTPRA-208ENST00000455631 GPR61Q9BZJ8 451 aa18.64■□□□□ 0.57
PTPRA-208ENST00000455631 C1orf21Q9H246 121 aa18.64■□□□□ 0.57
PTPRA-208ENST00000455631 CDH10Q9Y6N8 788 aa18.64■□□□□ 0.57
PTPRA-208ENST00000455631 U3KQK5 164 aa18.64■□□□□ 0.57
PTPRA-208ENST00000455631 ODF3BA8MYP8 253 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 SLC1A7O00341 560 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 CLUP10909 449 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 CRMP1Q14194 572 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 LDLRAD2Q5SZI1 272 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 RNF144BQ7Z419 303 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 LINC00471Q8N535 108 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 OR2T27Q8NH04 317 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 RNF133Q8WVZ7 376 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 HOPXQ9BPY8 73 aaPredicted RBP18.63■□□□□ 0.57
PTPRA-208ENST00000455631 ABHD6Q9BV23 337 aa18.63■□□□□ 0.57
PTPRA-208ENST00000455631 RFPL4AA6NLU0 287 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 RFPL4AL1F8VTS6 287 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 MTRF1O75570 445 aaKnown RBP18.62■□□□□ 0.57
PTPRA-208ENST00000455631 PIPP12273 146 aaPredicted RBP18.62■□□□□ 0.57
PTPRA-208ENST00000455631 JUNBP17275 347 aaPredicted RBP18.62■□□□□ 0.57
PTPRA-208ENST00000455631 SPI1P17947 270 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 RPL13AP3Q6NVV1 102 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 ZNF561Q8N587 486 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 CD177Q8N6Q3 437 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 OR4X2Q8NGF9 303 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 OR13D1Q8NGV5 346 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 OR6N2Q8NGY6 317 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 ZNF671Q8TAW3 534 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 CHID1Q9BWS9 393 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 OR51I2Q9H344 312 aa18.62■□□□□ 0.57
PTPRA-208ENST00000455631 DCAF13Q9NV06 445 aaKnown RBP18.62■□□□□ 0.57
PTPRA-208ENST00000455631 ZNF732B4DXR9 585 aa18.61■□□□□ 0.57
PTPRA-208ENST00000455631 CEBPDP49716 269 aaPredicted RBP18.61■□□□□ 0.57
PTPRA-208ENST00000455631 DYNLT3P51808 116 aa18.61■□□□□ 0.57
PTPRA-208ENST00000455631 OR12D2P58182 307 aa18.61■□□□□ 0.57
PTPRA-208ENST00000455631 GNG3P63215 75 aa18.61■□□□□ 0.57
PTPRA-208ENST00000455631 DYNC1I2Q13409 638 aaKnown RBP18.61■□□□□ 0.57
PTPRA-208ENST00000455631 CEP78Q5JTW2 689 aa18.61■□□□□ 0.57
PTPRA-208ENST00000455631 ZNF626Q68DY1 528 aa18.61■□□□□ 0.57
PTPRA-208ENST00000455631 GLYATQ6IB77 296 aa18.61■□□□□ 0.57
PTPRA-208ENST00000455631 LINC00482Q8N8I6 264 aa18.61■□□□□ 0.57
PTPRA-208ENST00000455631 RP9Q8TA86 221 aaKnown RBP18.61■□□□□ 0.57
PTPRA-208ENST00000455631 AMELYQ99218 206 aa18.61■□□□□ 0.57
PTPRA-208ENST00000455631 CHRM2P08172 466 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 H2BFMP0C1H6 154 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 OPRL1P41146 370 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 NUDT2P50583 147 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 SLC34A1Q06495 639 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 SMIM21Q3B7S5 101 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 HAGHLQ6PII5 290 aaPredicted RBP18.6■□□□□ 0.57
PTPRA-208ENST00000455631 ACP7Q6ZNF0 438 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 ERI1Q8IV48 349 aaKnown RBP18.6■□□□□ 0.57
PTPRA-208ENST00000455631 OR8D4Q8NGM9 314 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 FAM81AQ8TBF8 368 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 LYZL4Q96KX0 146 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 INTS14Q96SY0 518 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 TBC1D23Q9NUY8 699 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 HILPDAQ9Y5L2 63 aa18.6■□□□□ 0.57
PTPRA-208ENST00000455631 NDUFAB1O14561 156 aa18.59■□□□□ 0.57
PTPRA-208ENST00000455631 CCDC159P0C7I6 412 aa18.59■□□□□ 0.57
PTPRA-208ENST00000455631 NHLRC4P0CG21 123 aaPredicted RBP18.59■□□□□ 0.57
PTPRA-208ENST00000455631 AZGP1P25311 298 aaKnown RBP18.59■□□□□ 0.57
PTPRA-208ENST00000455631 RRM2P31350 389 aa18.59■□□□□ 0.57
PTPRA-208ENST00000455631 BLVRAP53004 296 aa18.59■□□□□ 0.57
PTPRA-208ENST00000455631 DMRTC1Q5HYR2 192 aa18.59■□□□□ 0.57
PTPRA-208ENST00000455631 C8orf82Q6P1X6 216 aaPredicted RBP18.59■□□□□ 0.57
PTPRA-208ENST00000455631 AQP3Q92482 292 aa18.59■□□□□ 0.57
PTPRA-208ENST00000455631 NMNAT2Q9BZQ4 307 aa18.59■□□□□ 0.57
PTPRA-208ENST00000455631 RASL12Q9NYN1 266 aa18.59■□□□□ 0.57
PTPRA-208ENST00000455631 PCDHGB5Q9Y5G0 923 aa18.59■□□□□ 0.57
PTPRA-208ENST00000455631 MEX3AA1L020 520 aaKnown RBP18.58■□□□□ 0.56
PTPRA-208ENST00000455631 C17orf98A8MV24 154 aa18.58■□□□□ 0.56
PTPRA-208ENST00000455631 HMGB1P1B2RPK0 211 aaPredicted RBP18.58■□□□□ 0.56
PTPRA-208ENST00000455631 C3orf84H3BNL1 204 aa18.58■□□□□ 0.56
PTPRA-208ENST00000455631 SLC22A2O15244 555 aa18.58■□□□□ 0.56
PTPRA-208ENST00000455631 PRDX2P32119 198 aa18.58■□□□□ 0.56
PTPRA-208ENST00000455631 DLX6P56179 175 aa18.58■□□□□ 0.56
PTPRA-208ENST00000455631 CALHM1Q8IU99 346 aa18.58■□□□□ 0.56
PTPRA-208ENST00000455631 OR11H6Q8NGC7 330 aa18.58■□□□□ 0.56
PTPRA-208ENST00000455631 ZNF488Q96MN9 340 aa18.58■□□□□ 0.56
PTPRA-208ENST00000455631 H3BUI4 141 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 GMNNO75496 209 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 SEMG1P04279 462 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 COX4I1P13073 169 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 CEACAM21Q3KPI0 293 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 KLHL22Q53GT1 634 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 LINC01590Q5TEZ4 76 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 C10orf99Q6UWK7 81 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.57■□□□□ 0.56
PTPRA-208ENST00000455631 MRPL41Q8IXM3 137 aaKnown RBP18.57■□□□□ 0.56
PTPRA-208ENST00000455631 FGFR1OP2Q9NVK5 253 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 IL20Q9NYY1 176 aa18.57■□□□□ 0.56
PTPRA-208ENST00000455631 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.57■□□□□ 0.56
PTPRA-208ENST00000455631 LPLP06858 475 aa18.56■□□□□ 0.56
PTPRA-208ENST00000455631 LMO1P25800 156 aa18.56■□□□□ 0.56
PTPRA-208ENST00000455631 ZNF770Q6IQ21 691 aaPredicted RBP18.56■□□□□ 0.56
PTPRA-208ENST00000455631 LCN8Q6JVE9 175 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms