RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ZMYND19Q96E35 227 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 SLC25A44Q96H78 314 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 CXorf58Q96LI9 332 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 RBP7Q96R05 134 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 CITED1Q99966 193 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 TUBA1CQ9BQE3 449 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 ZNF649Q9BS31 505 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 EMC6Q9BV81 110 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 FUNDC2Q9BWH2 189 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 SF3B5Q9BWJ5 86 aaKnown RBP4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 SYT4Q9H2B2 425 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 CALHM2Q9HA72 323 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 ADGRL4Q9HBW9 690 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 VCX3AQ9NNX9 186 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 PAQR5Q9NXK6 330 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 ING1Q9UK53 422 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 TP53TG5Q9Y2B4 290 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 LSM2Q9Y333 95 aaKnown RBP4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 FKBP7Q9Y680 259 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 PRR14LQ5THK1 2151 aa4.47□□□□□ -1.69
HMGB1P4-201ENST00000455362 SPTBN1Q01082 2364 aaKnown RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 IGKV3D-15A0A087WSY6 115 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 A0A1W2PN81 502 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 A0A1W2PP11 408 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 C12orf71A8MTZ7 269 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ZNF99A8MXY4 864 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 CENPBD1B2RD01 187 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 NPIPA2E9PIF3 369 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 PPIAL4DF5H284 164 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 TMEM178BH3BS89 294 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 NDUFS8O00217 210 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 SYT7O43581 403 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 CLN5O75503 358 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ZNF432O94892 652 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 PTHP01270 115 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 IGHG1P01857 330 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 CRYABP02511 175 aaKnown RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 PGA4P0DJD7 388 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 PGA3P0DJD8 388 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 CTLA4P16410 223 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 MYL12AP19105 171 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 CRABP1P29762 137 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 PTGS2P35354 604 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 CHRNA7P36544 502 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 NKX2-1P43699 371 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 PPT1P50897 306 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 BLVRAP53004 296 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 HCCSP53701 268 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ZNF415Q09FC8 603 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 GGTLC2Q14390 218 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 SPHARQ15513 63 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ETFDHQ16134 617 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 C3AR1Q16581 482 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 SPANXN2Q5MJ10 180 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 THEM4Q5T1C6 240 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 LCN1P1Q5VSP4 162 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ZNF324BQ6AW86 544 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 OR4A47Q6IF82 309 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 SLC25A47Q6Q0C1 308 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 CHMP1BQ7LBR1 199 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 HDDC2Q7Z4H3 204 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 LHFPL3Q86UP9 236 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 MMD2Q8IY49 270 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 TMEM123Q8N131 208 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 LINC00469Q8N7U9 141 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ZNF485Q8NCK3 441 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 BPIFCQ8NFQ6 507 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 OR10H4Q8NGA5 316 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 OR13F1Q8NGS4 319 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 OR6K6Q8NGW6 343 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 OR2T27Q8NH04 317 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 FNDC9Q8TBE3 224 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 EMG1Q92979 244 aaKnown RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 TMEM54Q969K7 222 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 PNPLA2Q96AD5 504 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 DGCR14Q96DF8 476 aaKnown RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ZNF385AQ96PM9 386 aaKnown RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 OR2M2Q96R28 347 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 OR5M11Q96RB7 305 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 GAL3ST1Q99999 423 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ALKBH7Q9BT30 221 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 RACGAP1Q9H0H5 632 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 MAGT1Q9H0U3 335 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 RERGLQ9H628 205 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ZNF71Q9NQZ8 489 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 INPP5EQ9NRR6 644 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 TAS2R16Q9NYV7 291 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 ERGIC3Q9Y282 383 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 NOSIPQ9Y314 301 aaKnown RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 EXOSC1Q9Y3B2 195 aaKnown RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 FLVCR1Q9Y5Y0 555 aa4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 DIDO1Q9BTC0 2240 aaKnown RBP4.46□□□□□ -1.7
HMGB1P4-201ENST00000455362 MYO18BQ8IUG5 2567 aa4.45□□□□□ -1.7
HMGB1P4-201ENST00000455362 IGKV1D-43A0A0B4J1Z2 117 aa4.45□□□□□ -1.7
HMGB1P4-201ENST00000455362 A0A1B0GTH9 108 aa4.45□□□□□ -1.7
HMGB1P4-201ENST00000455362 SMIM31A0A1B0GVY4 71 aa4.45□□□□□ -1.7
HMGB1P4-201ENST00000455362 A0A1W2PQL4 384 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P4-201ENST00000455362 DAPL1A0PJW8 107 aa4.45□□□□□ -1.7
HMGB1P4-201ENST00000455362 TVP23AA6NH52 213 aa4.45□□□□□ -1.7
HMGB1P4-201ENST00000455362 ZNF724A8MTY0 619 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms