RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 DSPP15924 2871 aaKnown RBP13.85□□□□□ -0.19
SNX17-204ENST00000453453 TPRP12270 2363 aaKnown RBP13.84□□□□□ -0.19
SNX17-204ENST00000453453 LOC100289279A0A1B0GTE1 492 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 RNF222A6NCQ9 220 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 FAM74A7A6NL05 159 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 RPL36A-HNRNPH2H7BZ11 118 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 FARS2O95363 451 aaKnown RBP13.84□□□□□ -0.19
SNX17-204ENST00000453453 OR4E1P0C645 316 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 TMIGD3P0DMS9 266 aaPredicted RBP13.84□□□□□ -0.19
SNX17-204ENST00000453453 ALOX5APP20292 161 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 TIMP3P35625 211 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 DEFA5Q01523 94 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 GUSBP1Q15486 140 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 RAB11BQ15907 218 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 PCK2Q16822 640 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 HFEQ30201 348 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 FAM74A3Q4VXF1 159 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 PAN3Q58A45 887 aaKnown RBP13.84□□□□□ -0.19
SNX17-204ENST00000453453 FBXW9Q5XUX1 488 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 DHRS7BQ6IAN0 325 aaPredicted RBP13.84□□□□□ -0.19
SNX17-204ENST00000453453 RTL6Q6ICC9 239 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 GABRG1Q8N1C3 465 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 OR51S1Q8NGJ8 323 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 FOXB1Q99853 325 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 BIN3Q9NQY0 253 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 TMEM38BQ9NVV0 291 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 MRM2Q9UI43 246 aaKnown RBP13.84□□□□□ -0.19
SNX17-204ENST00000453453 IKZF2Q9UKS7 526 aa13.84□□□□□ -0.19
SNX17-204ENST00000453453 CARHSP1Q9Y2V2 147 aaKnown RBP13.84□□□□□ -0.19
SNX17-204ENST00000453453 PRRC2CQ9Y520 2896 aaKnown RBP13.84□□□□□ -0.19
SNX17-204ENST00000453453 NUPL2O15504 423 aaKnown RBP13.83□□□□□ -0.2
SNX17-204ENST00000453453 FGF16O43320 207 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 PLATP00750 562 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 IFNA4P05014 189 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 CD37P11049 281 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 RPS27P42677 84 aaKnown RBP13.83□□□□□ -0.2
SNX17-204ENST00000453453 LIPNQ5VXI9 398 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 C11orf87Q6NUJ2 197 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 DOLPP1Q86YN1 238 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 LINC00346Q8IVM7 164 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 ST6GALNAC3Q8NDV1 305 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 STEAP2Q8NFT2 490 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 STOML3Q8TAV4 291 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 SLC2A8Q9NY64 477 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 MBD2Q9UBB5 411 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 PROCRQ9UNN8 238 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 PHF3Q92576 2039 aaKnown RBP13.83□□□□□ -0.2
SNX17-204ENST00000453453 ZGRF1Q86YA3 2104 aa13.83□□□□□ -0.2
SNX17-204ENST00000453453 DOK2O60496 412 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 CNOT4O95628 575 aaKnown RBP13.82□□□□□ -0.2
SNX17-204ENST00000453453 CD74P04233 296 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 NAAAQ02083 359 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 SNTB1Q13884 538 aaKnown RBP13.82□□□□□ -0.2
SNX17-204ENST00000453453 MEF2DQ14814 521 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 NRN1LQ496H8 165 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 FAM27BQ5VT28 67 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 OTPQ5XKR4 325 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 FAM166AQ6J272 317 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 PCSK4Q6UW60 755 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 ZNF813Q6ZN06 617 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 OR2W3Q7Z3T1 314 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 DCXRQ7Z4W1 244 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 OR2G2Q8NGZ5 317 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 OR52N5Q8NH56 324 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 NARS2Q96I59 477 aaKnown RBP13.82□□□□□ -0.2
SNX17-204ENST00000453453 ABHD6Q9BV23 337 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 POFUT1Q9H488 388 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 SAV1Q9H4B6 383 aaPredicted RBP13.82□□□□□ -0.2
SNX17-204ENST00000453453 FRRS1LQ9P0K9 344 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 MLXQ9UH92 298 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 PRSS50Q9UI38 385 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 KLHDC2Q9Y2U9 406 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 ATMQ13315 3056 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 SPTA1P02549 2419 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 TMEM218A2RU14 115 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 OR5H14A6NHG9 310 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 PRR32B1ATL7 298 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 DISC1C4P0D8 188 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 RAB3DO95716 219 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 CST2P09228 141 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 OR8G3PP0DMU2 310 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 KIR2DL2P43627 348 aaPredicted RBP13.82□□□□□ -0.2
SNX17-204ENST00000453453 PCBD1P61457 104 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 ARF1P84077 181 aaKnown RBP13.82□□□□□ -0.2
SNX17-204ENST00000453453 FAHD2BQ6P2I3 314 aaPredicted RBP13.82□□□□□ -0.2
SNX17-204ENST00000453453 SEM1Q6ZVN7 128 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 LURAP1LQ8IV03 231 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 SPAG16Q8N0X2 631 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 OR1M1Q8NGA1 313 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 PTX4Q96A99 478 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 NABP1Q96AH0 204 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 ZNF837Q96EG3 531 aaPredicted RBP13.82□□□□□ -0.2
SNX17-204ENST00000453453 FAHD2AQ96GK7 314 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 TSNAXQ99598 290 aaKnown RBP13.82□□□□□ -0.2
SNX17-204ENST00000453453 ASH2LQ9UBL3 628 aa13.82□□□□□ -0.2
SNX17-204ENST00000453453 TRAV18A0A075B6X5 111 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 APOC1P02654 83 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 FCER2P06734 321 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 HEXAP06865 529 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 GLI4P10075 376 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms