RNA–Protein interactions for RNA: ENST00000450966.5

USP40-208, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP40, Length 5,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-208ENST00000450966 ZMIZ1Q9ULJ6 1067 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 LRP5O75197 1615 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 CT45A6P0DMU7 189 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 CT45A5P0DMU8 189 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 CT45A7P0DMV0 189 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 IL10RAQ13651 578 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 HES1Q14469 280 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 KHDC3LQ587J8 217 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 CT45A1Q5HYN5 189 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 C6orf15Q6UXA7 325 aaPredicted RBP11.96□□□□□ -0.49
USP40-208ENST00000450966 PRR18Q8N4B5 295 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 OR4A16Q8NH70 328 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 CT45A3Q8NHU0 189 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 TPPP3Q9BW30 176 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 BARHL1Q9BZE3 327 aa11.96□□□□□ -0.49
USP40-208ENST00000450966 PLPP2O43688 288 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 FCARP24071 287 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 SSR4P51571 173 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 NKG7Q16617 165 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 LSRQ86X29 649 aaPredicted RBP11.96□□□□□ -0.5
USP40-208ENST00000450966 STARD5Q9NSY2 213 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 HSF4Q9ULV5 492 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 CA2P00918 260 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 AOAHP28039 575 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 PRDX1Q06830 199 aaKnown RBP11.96□□□□□ -0.5
USP40-208ENST00000450966 SHISA6Q6ZSJ9 500 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 RTN4RL1Q86UN2 441 aaPredicted RBP11.96□□□□□ -0.5
USP40-208ENST00000450966 OR2Y1Q8NGV0 311 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 MRGPRX4Q96LA9 322 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 SIGMAR1Q99720 223 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 ISG20L2Q9H9L3 353 aaKnown RBP11.96□□□□□ -0.5
USP40-208ENST00000450966 TINAGQ9UJW2 476 aa11.96□□□□□ -0.5
USP40-208ENST00000450966 NXPH3O95157 252 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
USP40-208ENST00000450966 GPR12P47775 334 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 C1orf185Q5T7R7 199 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 HIF1ANQ9NWT6 349 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 PSENENQ9NZ42 101 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 EMC9Q9Y3B6 208 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 CTNSO60931 367 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 MOSPD3O75425 235 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 C1SP09871 688 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 TRGC1P0CF51 173 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 KCNAB1Q14722 419 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 CTSL3PQ5NE16 218 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 MRPL2Q5T653 305 aaKnown RBP11.95□□□□□ -0.5
USP40-208ENST00000450966 VHLLQ6RSH7 139 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 CLEC18BQ6UXF7 455 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 CALHM3Q86XJ0 350 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 R3HDM4Q96D70 268 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 CHST11Q9NPF2 352 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 TAS2R4Q9NYW5 299 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 A0A087WUU8 490 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 SLC17A2O00624 439 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 C1orf105O95561 183 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 FKBP2P26885 142 aaKnown RBP11.95□□□□□ -0.5
USP40-208ENST00000450966 MTCP1P56278 107 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 GUCA2AQ02747 115 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 DEGS2Q6QHC5 323 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 CISD2Q8N5K1 135 aaKnown RBP11.95□□□□□ -0.5
USP40-208ENST00000450966 ADOQ96SZ5 270 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 NXF5Q9H1B4 397 aaKnown RBP11.95□□□□□ -0.5
USP40-208ENST00000450966 BANF2Q9H503 90 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 PPP1R3EQ9H7J1 279 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 IGLV3-10A0A075B6K4 115 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 KIR2DS1A0A191URI9 304 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 OR7C1O76099 320 aaPredicted RBP11.95□□□□□ -0.5
USP40-208ENST00000450966 PI3P19957 117 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 CCR2P41597 374 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 KIR2DS4P43632 304 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 KIR2DS1Q14954 304 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 MICBQ29980 383 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 SPANXN5Q5MJ07 72 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 Q7L0L9 218 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 KIR3DX1Q9H7L2 352 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 OR5AC2Q9NZP5 309 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 P2RY10O00398 339 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 LDB3O75112 727 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 SIGLEC14Q08ET2 396 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 MOB3CQ70IA8 216 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 FAM117AQ9C073 453 aa11.95□□□□□ -0.5
USP40-208ENST00000450966 GPR75O95800 540 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 IGHG1P01857 330 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 TSEN54Q7Z6J9 526 aaKnown RBP11.94□□□□□ -0.5
USP40-208ENST00000450966 DMBX1Q8NFW5 382 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 MIEN1Q9BRT3 115 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 VCX2Q9H322 139 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 DHCR7Q9UBM7 475 aaKnown RBP11.94□□□□□ -0.5
USP40-208ENST00000450966 NDUFA2O43678 99 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 PGA4P0DJD7 388 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 PGA5P0DJD9 388 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 HIST1H1TP22492 207 aaPredicted RBP11.94□□□□□ -0.5
USP40-208ENST00000450966 G6PCP35575 357 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 FAM27D1Q5T7N8 215 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 ZNF511Q8NB15 262 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 OR10G8Q8NGN5 311 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 CXorf36Q9H7Y0 433 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 KCNE5Q9UJ90 142 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 HOXB3P14651 431 aaPredicted RBP11.94□□□□□ -0.5
USP40-208ENST00000450966 IRF3Q14653 427 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms