RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 COX11Q9Y6N1 276 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 DSPPQ9NZW4 1301 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 IFITM10A6NMD0 228 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 SOCS6O14544 535 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PHF1O43189 567 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 CLEC3AO75596 197 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TRAPPC6AO75865 159 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 DDAH2O95865 285 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 GYPAP02724 150 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 HPXP02790 462 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 APODP05090 189 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 EDN1P05305 212 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 CD5P06127 495 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 IQCF3P0C7M6 154 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PIRTP0C851 137 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 SMIM13P0DJ93 91 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 ZNF93P35789 620 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 ZP1P60852 638 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 ROM1Q03395 351 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 AESQ08117 197 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 LINC01559Q495D7 138 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 FAM78BQ5VT40 261 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 AADACL3Q5VUY0 350 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 SLC8B1Q6J4K2 584 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 LCN10Q6JVE6 187 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PLXDC2Q6UX71 529 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 NPSR1Q6W5P4 371 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TECPR1Q7Z6L1 1165 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 RTN4RL1Q86UN2 441 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 ETFBKMTQ8IXQ9 262 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TMEM123Q8N131 208 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 GBGT1Q8N5D6 347 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TMEM99Q8N816 258 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PNPLA1Q8N8W4 532 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 OR10G8Q8NGN5 311 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 OR5AR1Q8NGP9 310 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 OR52E5Q8NH55 327 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 OR1L3Q8NH93 324 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 FAM110BQ8TC76 370 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 THAP3Q8WTV1 239 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 SLC38A5Q8WUX1 472 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 RGP1Q92546 391 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 IGSF8Q969P0 613 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 BORCS8Q96FH0 119 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 VN1R3Q9BXE9 311 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 MAGT1Q9H0U3 335 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 MEGF9Q9H1U4 602 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PHPT1Q9NRX4 125 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 TBL2Q9Y4P3 447 aaKnown RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 DOCK1Q14185 1865 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 GBF1Q92538 1859 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 SMIM28A0A1B0GU29 152 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 A0A1W2PRS3 328 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 IDSB3KWA1 339 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PRICKLE3O43900 615 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 MT-ATP6P00846 226 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 IL2RAP01589 272 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 APCSP02743 223 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 HLA-GP17693 338 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TNFRSF1BP20333 461 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 HRH1P35367 487 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 RPL34P49207 117 aaKnown RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 HINT1P49773 126 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 TMEM33P57088 247 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TBPL1P62380 186 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 JAG1P78504 1218 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 MRPS6P82932 125 aaKnown RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 FMODQ06828 376 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 NKG7Q16617 165 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 Q5PR19 223 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 RNASEKQ6P5S7 137 aaKnown RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 LIAT1Q6ZQX7 453 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 Q6ZVU0 165 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 DOK3Q7L591 496 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 LRP10Q7Z4F1 713 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 ZNF761Q86XN6 746 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 OR4S2Q8NH73 311 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PPTC7Q8NI37 304 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 UBALD1Q8TB05 177 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 WDYHV1Q96HA8 205 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 ADTRPQ96IZ2 230 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 OR6C1Q96RD1 312 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TIMP4Q99727 224 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BLQ99880 126 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 HSPB9Q9BQS6 159 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 EGLN1Q9GZT9 426 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 ZNF442Q9H7R0 627 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 NAA60Q9H7X0 242 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PADI3Q9ULW8 664 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 YBX2Q9Y2T7 364 aaKnown RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 TIMM9Q9Y5J7 89 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 IER3IP1Q9Y5U9 82 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TRBV5-3A0A0A0MS03 114 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 A0A1B0GTI1 187 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 CXorf51AA0A1B0GTR3 108 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 NPIPB15A6NHN6 443 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 FAM183AA6NL82 134 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 VSTM2BA6NLU5 285 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 YJEFN3A6XGL0 299 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TMEM238C9JI98 176 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms