RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 SIRT7Q9NRC8 400 aa13.64□□□□□ -0.23
RAB11FIP3-204ENST00000449879 HAO2Q9NYQ3 351 aa13.64□□□□□ -0.23
RAB11FIP3-204ENST00000449879 WARS2Q9UGM6 360 aaKnown RBP13.64□□□□□ -0.23
RAB11FIP3-204ENST00000449879 A0A1W2PRD5 423 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 A0A1W2PRF3 423 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 A0A1W2PRM7 423 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 E9PQ18 207 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 SELLP14151 372 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ACKR3P25106 362 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 HTR1FP30939 366 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 HCCSP53701 268 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 DLX1P56177 255 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 SNCBQ16143 134 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 DEGS2Q6QHC5 323 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 LDLRAD3Q86YD5 345 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 SLC35F2Q8IXU6 374 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 RNF170Q96K19 258 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 DCTN5Q9BTE1 182 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 TLNRD1Q9H1K6 362 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ADGRL4Q9HBW9 690 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ZNF391Q9UJN7 358 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 CAB39Q9Y376 341 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 LRP12Q9Y561 859 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 GMPPBQ9Y5P6 360 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 MPC1Q9Y5U8 109 aa13.63□□□□□ -0.23
RAB11FIP3-204ENST00000449879 NOTCH1P46531 2555 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ERICH4A6NGS2 130 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 M0QZ24 198 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 GPR37O15354 613 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 AKR7A2O43488 359 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 TFF1P04155 84 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 EEF1B2P24534 225 aaKnown RBP13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 PSMA6P60900 246 aaKnown RBP13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 TMED1Q13445 227 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ATPAF1Q5TC12 328 aaPredicted RBP13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 STUMQ69YW2 141 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 OR51G2Q8NGK0 314 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 OR10Z1Q8NGY1 313 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 OR5P3Q8WZ94 311 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 RDH12Q96NR8 316 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 MROQ9BYG7 248 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 CLN6Q9NWW5 311 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 COPS3Q9UNS2 423 aa13.62□□□□□ -0.23
RAB11FIP3-204ENST00000449879 TMEM210A6NLX4 147 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ZNF670-ZNF695F2Z2N8 137 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 RNASEK-C17orf49H0YIS7 233 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 TIMM23O14925 209 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ZNF254O75437 659 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 CST4P01036 141 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 FBP1P09467 338 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 CXCR4P61073 352 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 SNRPGP62308 76 aaKnown RBP13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ROM1Q03395 351 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 TAF9Q16594 264 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 MEDAGQ5VYS4 303 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 METAP1DQ6UB28 335 aaPredicted RBP13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 GDPGP1Q6ZNW5 385 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ZNF679Q8IYX0 411 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 Q8N7P7 452 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 NPRL2Q8WTW4 380 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 MED30Q96HR3 178 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 LYZL4Q96KX0 146 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 DMRTB1Q96MA1 342 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 HIST1H2AAQ96QV6 131 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 OR8B4Q96RC9 309 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 TTTY10Q9BZA0 68 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 C8orf4Q9NR00 106 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 SMPD3Q9NY59 655 aaPredicted RBP13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 IKZF2Q9UKS7 526 aa13.61□□□□□ -0.23
RAB11FIP3-204ENST00000449879 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■□□□ 11.5
RAB11FIP3-204ENST00000449879 BTBD17A6NE02 478 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 NKX6-3A6NJ46 265 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 PSMD9O00233 223 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 NPFFO15130 113 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 TGP01266 2768 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 NDUFB7P17568 137 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ATP6V1E1P36543 226 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 GUCA2AQ02747 115 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 KLRD1Q13241 179 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 OCLNQ16625 522 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 DGUOKQ16854 277 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 LRRC36Q1X8D7 754 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 FAM76BQ5HYJ3 339 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 SLC25A30Q5SVS4 291 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ASPHD2Q6ICH7 369 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ZNF322Q6U7Q0 402 aaPredicted RBP13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ZNF788Q6ZQV5 615 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 Q6ZSV7 163 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ZSCAN4Q8NAM6 433 aaPredicted RBP13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 OR8B12Q8NGG6 310 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 C8orf46Q8TAG6 207 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 UBE2FQ969M7 185 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 FGF23Q9GZV9 251 aaPredicted RBP13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 DNTTIP1Q9H147 329 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 ABCB9Q9NP78 766 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 FAM118AQ9NWS6 357 aa13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 SLC25A10Q9UBX3 287 aaPredicted RBP13.6□□□□□ -0.23
RAB11FIP3-204ENST00000449879 LOC100130705A0A1B0GUX0 176 aa13.59□□□□□ -0.23
RAB11FIP3-204ENST00000449879 A0A1W2PQ09 198 aa13.59□□□□□ -0.23
RAB11FIP3-204ENST00000449879 SNTNA6NMZ2 147 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms