RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 OR4A47Q6IF82 309 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF596Q8TC21 504 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 TMEM255BQ8WV15 326 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 SLAMF6Q96DU3 332 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 ATG10Q9H0Y0 220 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 SIDT1Q9NXL6 827 aaKnown RBP9.5□□□□□ -0.89
LINC00342-202ENST00000448494 ZFP37Q9Y6Q3 630 aaPredicted RBP9.5□□□□□ -0.89
LINC00342-202ENST00000448494 DOCK4Q8N1I0 1966 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 TRAV8-7A0A075B6U6 113 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 A0A1B0GV50 99 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 BLACEA4D250 179 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 CEACAM18A8MTB9 384 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 OR7C2O60412 319 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 IGLC2P0DOY2 106 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 F3P13726 295 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 LILRA4P59901 499 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 C5orf64Q2M2E5 130 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 SLC8B1Q6J4K2 584 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 TMEM182Q6ZP80 229 aaPredicted RBP9.5□□□□□ -0.89
LINC00342-202ENST00000448494 COLCA1Q6ZS62 124 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 Q6ZVH6 145 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 Q6ZWC4 215 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 RTN4RL1Q86UN2 441 aaPredicted RBP9.5□□□□□ -0.89
LINC00342-202ENST00000448494 WFDC8Q8IUA0 241 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 PNKDQ8N490 385 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 IL22RA1Q8N6P7 574 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 SLC35G5Q96KT7 338 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 MACROD1Q9BQ69 325 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 ABHD6Q9BV23 337 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 SIRT3Q9NTG7 399 aaPredicted RBP9.5□□□□□ -0.89
LINC00342-202ENST00000448494 C4orf47A7E2U8 309 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 HYPMO75409 117 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 SGSHP51688 502 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 PMPCAQ10713 525 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 CCSMST1Q4G0I0 132 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 GPR157Q5UAW9 335 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 FAM90A2PQ658T7 463 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 FAM166AQ6J272 317 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 FAM71F2Q6NXP2 309 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 GLB1LQ6UWU2 654 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 CENPVQ7Z7K6 275 aaPredicted RBP9.49□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF709Q8N972 641 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 OR51G1Q8NGK1 321 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 OR5B3Q8NH48 314 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 CLDND2Q8NHS1 167 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 FAM174AQ8TBP5 190 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 SCGB3A2Q96PL1 93 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 OR5B12Q96R08 314 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 LRFN3Q9BTN0 628 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 SH3BGRL3Q9H299 93 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 WFDC1Q9HC57 220 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 TUBD1Q9UJT1 453 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 C1QTNF3-AMACRE9PGA6 284 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 RBFOX2O43251 390 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC00342-202ENST00000448494 GPR137BO60478 399 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 HBE1P02100 147 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 CRYGCP07315 174 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 CTSDP07339 412 aaPredicted RBP9.49□□□□□ -0.89
LINC00342-202ENST00000448494 CTSAP10619 480 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 KCNE1P15382 129 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 GABRA2P47869 451 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 SOX2P48431 317 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 EMP2P54851 167 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 SUMO1P63165 101 aaKnown RBP9.49□□□□□ -0.89
LINC00342-202ENST00000448494 ANKRD55Q3KP44 614 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF260Q3ZCT1 412 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 FAM151BQ6UXP7 276 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 BATF2Q8N1L9 274 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 KLHDC1Q8N7A1 406 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 OR2AJ1Q8NGZ0 328 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 CMTM2Q8TAZ6 248 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 MARCH1Q8TCQ1 289 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 TMEM230Q96A57 120 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 ZMYND19Q96E35 227 aaPredicted RBP9.49□□□□□ -0.89
LINC00342-202ENST00000448494 OR6C1Q96RD1 312 aa9.49□□□□□ -0.89
LINC00342-202ENST00000448494 FAM230AA0A1W2PPH8 454 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 E5RGE8 158 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 TACSTD2P09758 323 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF43P17038 809 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF10P21506 573 aaPredicted RBP9.48□□□□□ -0.89
LINC00342-202ENST00000448494 PRLHRP49683 370 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 SNRPD1P62314 119 aaKnown RBP9.48□□□□□ -0.89
LINC00342-202ENST00000448494 SPATA45Q537H7 98 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 LRRC10Q5BKY1 277 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 DPPA3Q6W0C5 159 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 ABHD12BQ7Z5M8 362 aaPredicted RBP9.48□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF595Q8IYB9 648 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 C1orf174Q8IYL3 243 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 NPEPL1Q8NDH3 523 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 VN1R17PQ8TDU5 208 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
LINC00342-202ENST00000448494 RASL10BQ96S79 203 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 GPR132Q9UNW8 380 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 NSG2Q9Y328 171 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 LOC102723971A0A1B0GUV8 181 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 GAGE12BA1L429 117 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 MYBPHLA2RUH7 354 aa9.48□□□□□ -0.89
LINC00342-202ENST00000448494 FIGNL2A6NMB9 653 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms