RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ACOXLQ9NUZ1 547 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 DNAJB11Q9UBS4 358 aa10.56□□□□□ -0.72
PRPF40A-203ENST00000448428 PQLC2LA1A4F0 135 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 SNTNA6NMZ2 147 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 DHRS7CA6NNS2 312 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 SYT7O43581 403 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 MPZL2O60487 215 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 LIPFP07098 398 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 GLRA1P23415 457 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 KIR3DL2P43630 455 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 ACTC1P68032 377 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 ACTA1P68133 377 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 ZSCAN26Q16670 478 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 CDONQ4KMG0 1287 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 HAGHLQ6PII5 290 aaPredicted RBP10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 FAM220AQ7Z4H9 259 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 RDH10Q8IZV5 341 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 ACBD7Q8N6N7 88 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 FAM216BQ8N7L0 139 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 SIGLECL1Q8N7X8 197 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 ST8SIA4Q92187 359 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 Q96MT0 163 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 ADI1Q9BV57 179 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 AMBNQ9NP70 447 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 ESM1Q9NQ30 184 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 MYRFQ9Y2G1 1151 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 PCDHGB1Q9Y5G3 927 aa10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 SOX21Q9Y651 276 aaPredicted RBP10.55□□□□□ -0.72
PRPF40A-203ENST00000448428 A0A1B0GVI7 797 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 OR2AT4A6NND4 320 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF879B4DU55 563 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 NDUFB3O43676 98 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 SYNGR1O43759 233 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 ECDO95905 644 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 PLATP00750 562 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 SFTPBP07988 381 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 DBTP11182 482 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 SELLP14151 372 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 HAAOP46952 286 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF91Q05481 1191 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 IKZF1Q13422 519 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 LRRC36Q1X8D7 754 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 C11orf91Q3C1V1 193 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 FDX2Q6P4F2 183 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF788Q6ZQV5 615 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 LHFPL3Q86UP9 236 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF573Q86YE8 665 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 ZDHHC22Q8N966 263 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 PNLDC1Q8NA58 520 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 OR2G2Q8NGZ5 317 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 ANGPTL6Q8NI99 470 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 ZFAND2BQ8WV99 257 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 APH1BQ8WW43 257 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 TMIGD2Q96BF3 282 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF48Q96MX3 618 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 JMJD8Q96S16 334 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 MS4A7Q9GZW8 240 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 DNTTIP1Q9H147 329 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 SMPD3Q9NY59 655 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 FRRS1LQ9P0K9 344 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 NLKQ9UBE8 527 aa10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 RPUSD1Q9UJJ7 312 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-203ENST00000448428 IGKV1D-17A0A075B6S4 117 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 TRAV40A0A0B4J280 105 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 ANKRD61A6NGH8 418 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 ANKRD65E5RJM6 399 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 J3QLW9 94 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 TOX4O94842 621 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 ACAA1P09110 424 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 PSG2P11465 335 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 MMP9P14780 707 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF19P17023 458 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 NANOS3P60323 173 aaKnown RBP10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 ARF6P62330 175 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 UBE2V2Q15819 145 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 DGUOKQ16854 277 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 LPCAT4Q643R3 524 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 ANGPTL5Q86XS5 388 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 LY6G5BQ8NDX9 201 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 CCDC54Q8NEL0 328 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF555Q8NEP9 628 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 PELI1Q96FA3 418 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 MED30Q96HR3 178 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 C4orf36Q96KX1 117 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 ZNF488Q96MN9 340 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 RDH12Q96NR8 316 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 WDFY2Q96P53 400 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 GAFA1Q96PS6 74 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 TBX15Q96SF7 602 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 PCGF1Q9BSM1 259 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 SIRPDQ9H106 197 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 CNTD2Q9H8S5 307 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 PLEKHA1Q9HB21 404 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 RASL12Q9NYN1 266 aa10.53□□□□□ -0.72
PRPF40A-203ENST00000448428 LOC107986453A0A1B0GWG9 222 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 TRIM77I1YAP6 450 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 J3QT63 122 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 GPR37O15354 613 aa10.52□□□□□ -0.73
PRPF40A-203ENST00000448428 NOS1APO75052 506 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms