RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ATPAF1Q5TC12 328 aaPredicted RBP12.21□□□□□ -0.45
USE1-202ENST00000445667 MEDAGQ5VYS4 303 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 TMEM42Q69YG0 159 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 RBMS3Q6XE24 437 aaKnown RBP12.21□□□□□ -0.45
USE1-202ENST00000445667 BRD3OSQ6XYD6 125 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 Q6ZSR3 168 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 DOK3Q7L591 496 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 ENTHD1Q8IYW4 607 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 PRSS35Q8N3Z0 413 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 PNLDC1Q8NA58 520 aaKnown RBP12.21□□□□□ -0.45
USE1-202ENST00000445667 ANGPTL6Q8NI99 470 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 ZNF671Q8TAW3 534 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 ZFAND2BQ8WV99 257 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.45
USE1-202ENST00000445667 C12orf43Q96C57 262 aaKnown RBP12.21□□□□□ -0.45
USE1-202ENST00000445667 ACOXLQ9NUZ1 547 aa12.21□□□□□ -0.45
USE1-202ENST00000445667 LOC100130705A0A1B0GUX0 176 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 A0A1B0GVI7 797 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 DAPL1A0PJW8 107 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 J3QRE1 110 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 DLGAP1O14490 977 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 SYT7O43581 403 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 SYNGR1O43759 233 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 ECDO95905 644 aaPredicted RBP12.2□□□□□ -0.46
USE1-202ENST00000445667 LIPFP07098 398 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 MMP9P14780 707 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 GABRB1P18505 474 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 CCL1P22362 96 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 GABRA2P47869 451 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 OR12D2P58182 307 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 ISL1P61371 349 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 ACTG1P63261 375 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 ZNF788Q6ZQV5 615 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 RDH10Q8IZV5 341 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 FAM216AQ8WUB2 273 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 TMIGD2Q96BF3 282 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 ZNF488Q96MN9 340 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 WDFY2Q96P53 400 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 GAFA1Q96PS6 74 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 TBX15Q96SF7 602 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 FAM118AQ9NWS6 357 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 NLKQ9UBE8 527 aa12.2□□□□□ -0.46
USE1-202ENST00000445667 RPUSD1Q9UJJ7 312 aaKnown RBP12.2□□□□□ -0.46
USE1-202ENST00000445667 MDFIC2A0A1B0GVS7 189 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 OR2AT4A6NND4 320 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 PSG2P11465 335 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 HAAOP46952 286 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 UBA52P62987 128 aaKnown RBP12.19□□□□□ -0.46
USE1-202ENST00000445667 BAMBIQ13145 260 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 DGUOKQ16854 277 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 LRRC10Q5BKY1 277 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 METTL11BQ5VVY1 283 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 RUSC1-AS1Q66K80 236 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 FAM220AQ7Z4H9 259 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 BATF2Q8N1L9 274 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 RHOXF1Q8NHV9 184 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 TRMT10AQ8TBZ6 339 aaKnown RBP12.19□□□□□ -0.46
USE1-202ENST00000445667 NPRL2Q8WTW4 380 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 H1FXQ92522 213 aaKnown RBP12.19□□□□□ -0.46
USE1-202ENST00000445667 LGALS12Q96DT0 336 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 MED30Q96HR3 178 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 ADI1Q9BV57 179 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 SIRPDQ9H106 197 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 CNTD2Q9H8S5 307 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 AMBNQ9NP70 447 aa12.19□□□□□ -0.46
USE1-202ENST00000445667 EXOGQ9Y2C4 368 aaKnown RBP12.19□□□□□ -0.46
USE1-202ENST00000445667 IGKV1D-17A0A075B6S4 117 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 PQLC2LA1A4F0 135 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 NKX6-3A6NJ46 265 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 SNTNA6NMZ2 147 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 DHRS7CA6NNS2 312 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 J3QLW9 94 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 ACAA1P09110 424 aaPredicted RBP12.18□□□□□ -0.46
USE1-202ENST00000445667 ZNF19P17023 458 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 ACTC1P68032 377 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 ACTA1P68133 377 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 IL13RA1P78552 427 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 ZNF91Q05481 1191 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 UBE2V2Q15819 145 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 C11orf91Q3C1V1 193 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 CDONQ4KMG0 1287 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 GPR157Q5UAW9 335 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 C9orf139Q6ZV77 190 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 ANGPTL5Q86XS5 388 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 ZNF573Q86YE8 665 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 ACBD7Q8N6N7 88 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 LY6G5BQ8NDX9 201 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 OR2G2Q8NGZ5 317 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 GCDHQ92947 438 aaPredicted RBP12.18□□□□□ -0.46
USE1-202ENST00000445667 STMN2Q93045 179 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 C1orf147Q96MC9 270 aaPredicted RBP12.18□□□□□ -0.46
USE1-202ENST00000445667 DNTTIP1Q9H147 329 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 PLEKHA1Q9HB21 404 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 FRRS1LQ9P0K9 344 aa12.18□□□□□ -0.46
USE1-202ENST00000445667 CENPVL3A0A0U1RRI6 287 aa12.17□□□□□ -0.46
USE1-202ENST00000445667 LOC107986453A0A1B0GWG9 222 aa12.17□□□□□ -0.46
USE1-202ENST00000445667 FAM230AA0A1W2PPH8 454 aa12.17□□□□□ -0.46
USE1-202ENST00000445667 ANKRD61A6NGH8 418 aa12.17□□□□□ -0.46
USE1-202ENST00000445667 DNAJC9-AS1A6NH13 148 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms