RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 F2RL1P55085 397 aa12.39□□□□□ -0.43
SMARCA4-204ENST00000444061 ADAM5Q6NVV9 412 aa12.39□□□□□ -0.43
SMARCA4-204ENST00000444061 FADS6Q8N9I5 356 aa12.39□□□□□ -0.43
SMARCA4-204ENST00000444061 ZNF275Q9NSD4 429 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-204ENST00000444061 COPS3Q9UNS2 423 aa12.39□□□□□ -0.43
SMARCA4-204ENST00000444061 MDC1Q14676 2089 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 IGKV1D-42A0A075B6H8 117 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 TRGV10A0A0A0MS01 117 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 TXNDC12O95881 172 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 GAAP10253 952 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 OR10X1Q8NGY0 326 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 OR56B4Q8NH76 319 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 GPX7Q96SL4 187 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 SLC17A2O00624 439 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 ARPC5O15511 151 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 PLPP2O43688 288 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 TRAF3IP2O43734 574 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 ZNF708P17019 499 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 GIFP27352 417 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 C1orf174Q8IYL3 243 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 GABRG1Q8N1C3 465 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 ZPLD1Q8TCW7 415 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 MRPS18CQ9Y3D5 142 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 IFNA5P01569 189 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 STEAP1BQ6NZ63 245 aa12.38□□□□□ -0.43
SMARCA4-204ENST00000444061 FAM221AA4D161 298 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 SNAPINO95295 136 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 APOA2P02652 100 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 SUCLG1P53597 346 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 OR10A3P58181 314 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 FBXW12Q6X9E4 464 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 IDO2Q6ZQW0 420 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 FAM58AQ8N1B3 248 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 PRSS35Q8N3Z0 413 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 OR1K1Q8NGR3 316 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 MFFQ9GZY8 342 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 HRASLSQ9HDD0 168 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 TRAV1-2A0A0B4J238 106 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 IFNA17P01571 189 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 ZNF385CQ66K41 422 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 SKA3Q8IX90 412 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 OR10AD1Q8NGE0 317 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 DEPPQ9NTK1 212 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 INTS1Q8N201 2190 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 TMEM235A6NFC5 223 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 SLC22A5O76082 557 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 RPS27AP62979 156 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 UBA52P62987 128 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 PSG4Q00888 419 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 SLC39A7Q92504 469 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 DIDO1Q9BTC0 2240 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 ASCL1P50553 236 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 ZNF85Q03923 595 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 ELP2Q6IA86 826 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 COMTD1Q86VU5 262 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 OR2J1Q9GZK6 312 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 ELOVL5Q9NYP7 299 aa12.37□□□□□ -0.43
SMARCA4-204ENST00000444061 ADAM20O43506 726 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 CSF3P09919 207 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 C9orf152Q5JTZ5 239 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 SLC25A47Q6Q0C1 308 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 SVBPQ8N300 66 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 ZNF808Q8N4W9 903 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 SCPEP1Q9HB40 452 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 RTTNQ86VV8 2226 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 SRCAPQ6ZRS2 3230 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 TRAV38-1A0A0B4J264 116 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 PMP2P02689 132 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 CBR1P16152 277 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 FUT3P21217 361 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 ETV6P41212 452 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 C19orf57Q0VDD7 668 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 CISD1Q9NZ45 108 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 ICE1Q9Y2F5 2266 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 A1L4Q6 167 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 BTG1P62324 171 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 ARHGEF39Q8N4T4 335 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 RNF115Q9Y4L5 304 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 TMEM229AB2RXF0 380 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 ZIC2O95409 532 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 C1QBP02746 253 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 ZMYND11Q15326 602 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 ACSF3Q4G176 576 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 OR14K1Q8NGZ2 314 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 POC1BQ8TC44 478 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 DVL3Q92997 716 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 S1PR3Q99500 378 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 SLC23A1Q9UHI7 598 aa12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 GOLGB1Q14789 3259 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-204ENST00000444061 CEBPZOSA8MTT3 80 aa12.35□□□□□ -0.43
SMARCA4-204ENST00000444061 M0QYG6 137 aa12.35□□□□□ -0.43
SMARCA4-204ENST00000444061 RPS2P15880 293 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-204ENST00000444061 EGR4Q05215 589 aa12.35□□□□□ -0.43
SMARCA4-204ENST00000444061 Q6ZT83 130 aa12.35□□□□□ -0.43
SMARCA4-204ENST00000444061 CELF2-AS1Q8N7Q2 184 aa12.35□□□□□ -0.43
SMARCA4-204ENST00000444061 MSL2Q9HCI7 577 aa12.35□□□□□ -0.43
SMARCA4-204ENST00000444061 KIF25Q9UIL4 384 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms