RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 KRT77Q7Z794 578 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 CALHM1Q8IU99 346 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF561Q8N587 486 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 TMEM185AQ8NFB2 350 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 OR8B12Q8NGG6 310 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 HPSE2Q8WWQ2 592 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 SEH1LQ96EE3 360 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 FEVQ99581 238 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 MROQ9BYG7 248 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 YIPF3Q9GZM5 350 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 OR51I2Q9H344 312 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 MED20Q9H944 212 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF319Q9P2F9 582 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 POLDIP2Q9Y2S7 368 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 TMEM14AQ9Y6G1 99 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 A0A1W2PRD5 423 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 A0A1W2PRF3 423 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 A0A1W2PRM7 423 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 XPNPEP2O43895 674 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF254O75437 659 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 E2F6O75461 281 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 CST1P01037 141 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 PSG2P11465 335 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 SELLP14151 372 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 CAPZA1P52907 286 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF829Q3KNS6 432 aaPredicted RBP11.26□□□□□ -0.61
PTPRE-203ENST00000442830 FBLN7Q53RD9 439 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 COMMD2Q86X83 199 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 FAM185AQ8N0U4 392 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 OR4S1Q8NGB4 309 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 ASB17Q8WXJ9 295 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 DNAJC9Q8WXX5 260 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 FOXRED1Q96CU9 486 aaPredicted RBP11.26□□□□□ -0.61
PTPRE-203ENST00000442830 ASB9Q96DX5 294 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 AMELYQ99218 206 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 NIPSNAP1Q9BPW8 284 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 USE1Q9NZ43 259 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 ENPP5Q9UJA9 477 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF222Q9UK12 451 aa11.26□□□□□ -0.61
PTPRE-203ENST00000442830 IGKV1D-17A0A075B6S4 117 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF732B4DXR9 585 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 H3BUI4 141 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 GNGT2O14610 69 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 ERVFRD-1P60508 538 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 ACTR3P61158 418 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 RPS7P62081 194 aaKnown RBP11.25□□□□□ -0.61
PTPRE-203ENST00000442830 RPL31P62899 125 aaKnown RBP11.25□□□□□ -0.61
PTPRE-203ENST00000442830 ELF3P78545 371 aaPredicted RBP11.25□□□□□ -0.61
PTPRE-203ENST00000442830 KPRPQ5T749 579 aaPredicted RBP11.25□□□□□ -0.61
PTPRE-203ENST00000442830 PLBD1Q6P4A8 553 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF573Q86YE8 665 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 AQP3Q92482 292 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 CFHR4Q92496 578 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 LYZL4Q96KX0 146 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 PRRG3Q9BZD7 231 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 YY1AP1Q9H869 796 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 MOB1AQ9H8S9 216 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 VNN3Q9NY84 501 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 PITPNC1Q9UKF7 332 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF281Q9Y2X9 895 aa11.25□□□□□ -0.61
PTPRE-203ENST00000442830 TMEM269A0A1B0GVZ9 245 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 VGLL3A8MV65 326 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 B2RBV5 119 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 SELENOFO60613 162 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 RBP4P02753 201 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 OSMP13725 252 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 ANXA8P13928 327 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 ALOX5APP20292 161 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 EMX1Q04741 257 aaPredicted RBP11.24□□□□□ -0.61
PTPRE-203ENST00000442830 PPP1R8Q12972 351 aaKnown RBP11.24□□□□□ -0.61
PTPRE-203ENST00000442830 GINS1Q14691 196 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF684Q5T5D7 378 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 PLCXD3Q63HM9 321 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 ACP7Q6ZNF0 438 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 PIGWQ7Z7B1 504 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 IQCF1Q8N6M8 205 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 POC1AQ8NBT0 407 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 ZNRF1Q8ND25 227 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 KRTAP3-3Q9BYR6 98 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 C1orf21Q9H246 121 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 PPP1R3EQ9H7J1 279 aa11.24□□□□□ -0.61
PTPRE-203ENST00000442830 TBL2Q9Y4P3 447 aaKnown RBP11.24□□□□□ -0.61
PTPRE-203ENST00000442830 DHRS7CA6NNS2 312 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 J3QT63 122 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 NOS1APO75052 506 aaPredicted RBP11.23□□□□□ -0.61
PTPRE-203ENST00000442830 DHRS3O75911 302 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 NRASP01111 189 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 ALDOBP05062 364 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 CALB2P22676 271 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 RIDAP52758 137 aaKnown RBP11.23□□□□□ -0.61
PTPRE-203ENST00000442830 CDK5Q00535 292 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 ROM1Q03395 351 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 BEAN1Q3B7T3 259 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 HCP5Q6MZN7 132 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 HAGHLQ6PII5 290 aaPredicted RBP11.23□□□□□ -0.61
PTPRE-203ENST00000442830 TRPM8Q7Z2W7 1104 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 C1QL4Q86Z23 238 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 CPOQ8IVL8 374 aa11.23□□□□□ -0.61
PTPRE-203ENST00000442830 ZNF679Q8IYX0 411 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms