RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 MED22Q15528 200 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 CRIP3Q6Q6R5 217 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 UTS2BQ765I0 119 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 PEG10Q86TG7 708 aaKnown RBP13.43□□□□□ -0.26
USP39-205ENST00000442708 ANGPTL5Q86XS5 388 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 CALHM1Q8IU99 346 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 PARP16Q8N5Y8 322 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 GPR148Q8TDV2 347 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 LRRC29Q8WV35 223 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 TSEN15Q8WW01 171 aaKnown RBP13.43□□□□□ -0.26
USP39-205ENST00000442708 AQP3Q92482 292 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 HPS1Q92902 700 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 ORAI1Q96D31 301 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 YTHDF1Q9BYJ9 559 aaKnown RBP13.43□□□□□ -0.26
USP39-205ENST00000442708 BLOC1S6Q9UL45 172 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 DHDHQ9UQ10 334 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 ZFHX3Q15911 3703 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 PPIAL4EA0A075B759 164 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 FAM157AC9JC47 383 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 PPIAL4DF5H284 164 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 AKR7A2O43488 359 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 SYNGR1O43759 233 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 IGHV2-5P01817 119 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 PPIAL4FP0DN26 164 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 IRF2P14316 349 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 ATF1P18846 271 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 SFRP4Q6FHJ7 346 aaPredicted RBP13.42□□□□□ -0.26
USP39-205ENST00000442708 HAGHLQ6PII5 290 aaPredicted RBP13.42□□□□□ -0.26
USP39-205ENST00000442708 C1orf87Q8N0U7 546 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 DEFB108BQ8NET1 73 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 OR13C9Q8NGT0 318 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 C1orf159Q96HA4 380 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 GAL3ST1Q99999 423 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 TMEM246Q9BRR3 403 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 WDR13Q9H1Z4 485 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 ZNF665Q9H7R5 613 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 ACOT13Q9NPJ3 140 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 PPIAL4AQ9Y536 164 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 MALRD1Q5VYJ5 2156 aa13.42□□□□□ -0.26
USP39-205ENST00000442708 ARHGAP32A7KAX9 2087 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 IGHV3OR15-7A0A075B7D8 119 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 TNFRSF13BO14836 293 aaPredicted RBP13.41□□□□□ -0.26
USP39-205ENST00000442708 GATBO75879 557 aaKnown RBP13.41□□□□□ -0.26
USP39-205ENST00000442708 SERPINA3P01011 423 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 CD1AP06126 327 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 RPSAP08865 295 aaKnown RBP13.41□□□□□ -0.26
USP39-205ENST00000442708 AZGP1P25311 298 aaKnown RBP13.41□□□□□ -0.26
USP39-205ENST00000442708 MDH2P40926 338 aaKnown RBP13.41□□□□□ -0.26
USP39-205ENST00000442708 HAAOP46952 286 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 FUT6P51993 359 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 GMFBP60983 142 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 EMX1Q04741 257 aaPredicted RBP13.41□□□□□ -0.26
USP39-205ENST00000442708 INSL4Q14641 139 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 TBCEQ15813 527 aaPredicted RBP13.41□□□□□ -0.26
USP39-205ENST00000442708 KRTAP21-3Q3LHN1 58 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 ZNF404Q494X3 552 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 TMEM155Q4W5P6 130 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 ZNF529Q6P280 563 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 LYPD2Q6UXB3 125 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 Q71RC1 249 aaPredicted RBP13.41□□□□□ -0.26
USP39-205ENST00000442708 BIVMQ86UB2 503 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 FAM90A1Q86YD7 464 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 SPARTQ8N0X7 666 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 MSI2Q96DH6 328 aaKnown RBP13.41□□□□□ -0.26
USP39-205ENST00000442708 ZNF488Q96MN9 340 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 OPALINQ96PE5 141 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 SPACA5Q96QH8 159 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 ZCCHC4Q9H5U6 513 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 TAS2R4Q9NYW5 299 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 SLC7A11Q9UPY5 501 aa13.41□□□□□ -0.26
USP39-205ENST00000442708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.4□□□□□ -0.269e-10■■■■■ 32.2
USP39-205ENST00000442708 TRBV5-7A0A0A0MS05 114 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 CEACAM18A8MTB9 384 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 SRRM5B3KS81 715 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 F5H0A9 414 aaPredicted RBP13.4□□□□□ -0.26
USP39-205ENST00000442708 J3QT63 122 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 LGALS8O00214 317 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 FSTL3O95633 263 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 TFF1P04155 84 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 OCM2P0CE71 109 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 HSMCR30P0CW71 290 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 PCMT1P22061 227 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 MPZP25189 248 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 SEC61A1P61619 476 aaKnown RBP13.4□□□□□ -0.26
USP39-205ENST00000442708 YIF1BQ5BJH7 314 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 TEX36Q5VZQ5 186 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 CLEC9AQ6UXN8 241 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 ZNF573Q86YE8 665 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 SERPINA12Q8IW75 414 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 BATF2Q8N1L9 274 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 DNAAF1Q8NEP3 725 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 OR51A2Q8NGJ7 313 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 OR10Z1Q8NGY1 313 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 TMEM106AQ96A25 262 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 TECTBQ96PL2 329 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 OR14A2Q96R54 314 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 ISYNA1Q9NPH2 558 aa13.4□□□□□ -0.26
USP39-205ENST00000442708 MTORP42345 2549 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 A0A1W2PPK0 400 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 OOEPA6NGQ2 149 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms