RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 LIMS1P48059 325 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 GNG10P50151 68 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 FABP5Q01469 135 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 NAAAQ02083 359 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 DHODHQ02127 395 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 NDUFAF6Q330K2 333 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 MRPL2Q5T653 305 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 TSPO2Q5TGU0 170 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ZNF613Q6PF04 617 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 HAGHLQ6PII5 290 aaPredicted RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ZNF627Q7L945 461 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 PUSL1Q8N0Z8 303 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 OR2C3Q8N628 320 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ZIC4Q8N9L1 334 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 Q8NFD4 153 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 OR6T1Q8NGN1 323 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ACOT11Q8WXI4 607 aaPredicted RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 MSI2Q96DH6 328 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 SLC41A3Q96GZ6 507 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 LRR1Q96L50 414 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 SEBOXQ9HB31 216 aaPredicted RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 CA10Q9NS85 328 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 CLN6Q9NWW5 311 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 DNAJC27Q9NZQ0 273 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 PIPOXQ9P0Z9 390 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 GHRLQ9UBU3 117 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ZNF346Q9UL40 294 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 A4GNTQ9UNA3 340 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 HEATR1Q9H583 2144 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ROS1P08922 2347 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 IGHV1-18A0A0C4DH31 117 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 A0A1W2PN81 502 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 MEX3AA1L020 520 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 CPSF4LA6NMK7 179 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ZNF729A6NN14 1252 aaPredicted RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 MCRIP1C9JLW8 97 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 OR2T1O43869 369 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 GATBO75879 557 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 NPR2P20594 1047 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 TACR3P29371 465 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 CHRNA7P36544 502 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ALKBH1Q13686 389 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 INSL4Q14641 139 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 SSX2Q16385 188 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 MAPK14Q16539 360 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 SLC36A2Q495M3 483 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 OR2B11Q5JQS5 317 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ENTPD8Q5MY95 495 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 RPL13AP3Q6NVV1 102 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ZNF813Q6ZN06 617 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 Q6ZTK2 550 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 PDZD9Q8IXQ8 264 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 RNF113BQ8IZP6 322 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 SGMS2Q8NHU3 365 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ST7LQ8TDW4 575 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 LIPHQ8WWY8 451 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 NARS2Q96I59 477 aaKnown RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 RIMS4Q9H426 269 aaPredicted RBP5.19□□□□□ -1.58
PTPRR-204ENST00000440835 RHCGQ9UBD6 479 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 ASH2LQ9UBL3 628 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 NUBP2Q9Y5Y2 271 aa5.19□□□□□ -1.58
PTPRR-204ENST00000440835 VPS13CQ709C8 3753 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 CDHR4A6H8M9 788 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 ZAR1LA6NP61 321 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 B4DSR2 109 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 ZNF593O00488 134 aaPredicted RBP5.18□□□□□ -1.58
PTPRR-204ENST00000440835 AHSA1O95433 338 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 IGF2P01344 180 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 OR4A8P0C604 315 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 OR4E1P0C645 316 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 RBM34P42696 430 aaKnown RBP5.18□□□□□ -1.58
PTPRR-204ENST00000440835 MECP2P51608 486 aaKnown RBP5.18□□□□□ -1.58
PTPRR-204ENST00000440835 CRISP1P54107 249 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 SPOCK1Q08629 439 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 SMCO1Q147U7 214 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 GUCA2BQ16661 112 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 TMEM255AQ5JRV8 349 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 TMEM225Q6GV28 225 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 LYPD4Q6UWN0 246 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 CD300LDQ6UXZ3 194 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 ATG4DQ86TL0 474 aaPredicted RBP5.18□□□□□ -1.58
PTPRR-204ENST00000440835 PROKR2Q8NFJ6 384 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 OR4K5Q8NGD3 323 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 RXFP4Q8TDU9 374 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 DTD1Q8TEA8 209 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 ZNF524Q96C55 264 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 FBXO17Q96EF6 278 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 OXGR1Q96P68 337 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 DPAGT1Q9H3H5 408 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 MS4A5Q9H3V2 200 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 C1orf198Q9H425 327 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 METRNQ9UJH8 293 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 ARFGEF3Q5TH69 2177 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 SONP18583 2426 aaKnown RBP5.18□□□□□ -1.58
PTPRR-204ENST00000440835 PLCE1Q9P212 2302 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 TRBV4-1A0A0J9YWV2 114 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 IRGMA1A4Y4 181 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 H3BN98 237 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 SULT1C2O00338 296 aa5.18□□□□□ -1.58
PTPRR-204ENST00000440835 NPIPB7O75200 414 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms