RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CD276Q5ZPR3 534 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 STUMQ69YW2 141 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 FDX2Q6P4F2 183 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 HAGHLQ6PII5 290 aaPredicted RBP19.63■□□□□ 0.73
VARS-217ENST00000440048 DUX4L9Q6RFH8 374 aaPredicted RBP19.63■□□□□ 0.73
VARS-217ENST00000440048 LHFPL3Q86UP9 236 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 RDH10Q8IZV5 341 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 CCDC54Q8NEL0 328 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 OR5T2Q8NGG2 359 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 AQP3Q92482 292 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 C4orf36Q96KX1 117 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 SNTG1Q9NSN8 517 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 MRPS18AQ9NVS2 196 aaKnown RBP19.63■□□□□ 0.73
VARS-217ENST00000440048 DNAJB11Q9UBS4 358 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 DUX4Q9UBX2 424 aa19.63■□□□□ 0.73
VARS-217ENST00000440048 RPL36Q9Y3U8 105 aaKnown RBP19.63■□□□□ 0.73
VARS-217ENST00000440048 LOC107986453A0A1B0GWG9 222 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 DVL1O14640 695 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 ENSAO43768 121 aaKnown RBP19.62■□□□□ 0.73
VARS-217ENST00000440048 CLIC3O95833 236 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 IGHA1P01876 353 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 UBCP0CG48 685 aaKnown RBP19.62■□□□□ 0.73
VARS-217ENST00000440048 AMY2BP19961 511 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 ACTA2P62736 377 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 ACTG2P63267 376 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 GABPB1Q06547 395 aaPredicted RBP19.62■□□□□ 0.73
VARS-217ENST00000440048 GALEQ14376 348 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 SMN1Q16637 294 aaKnown RBP19.62■□□□□ 0.73
VARS-217ENST00000440048 KLF17Q5JT82 389 aaPredicted RBP19.62■□□□□ 0.73
VARS-217ENST00000440048 ZNF691Q5VV52 312 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 OR52I1Q8NGK6 324 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 ZNF671Q8TAW3 534 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 CYGBQ8WWM9 190 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 PELI1Q96FA3 418 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 MRPL48Q96GC5 212 aaKnown RBP19.62■□□□□ 0.73
VARS-217ENST00000440048 ALG8Q9BVK2 526 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 PLEKHA1Q9HB21 404 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 FRRS1LQ9P0K9 344 aa19.62■□□□□ 0.73
VARS-217ENST00000440048 PQLC2LA1A4F0 135 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 ANKRD61A6NGH8 418 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 HTR1AP08908 422 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 GLRA1P23415 457 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 NANOS3P60323 173 aaKnown RBP19.61■□□□□ 0.73
VARS-217ENST00000440048 ATPAF1Q5TC12 328 aaPredicted RBP19.61■□□□□ 0.73
VARS-217ENST00000440048 TTC23Q5W5X9 447 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 SLC36A1Q7Z2H8 476 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 FGFRL1Q8N441 504 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 FAM216BQ8N7L0 139 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 ZNF649Q9BS31 505 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 INPP5EQ9NRR6 644 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 ERVK13-1Q9NX77 482 aa19.61■□□□□ 0.73
VARS-217ENST00000440048 FBN3Q75N90 2809 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 CASQ2O14958 399 aaPredicted RBP19.6■□□□□ 0.73
VARS-217ENST00000440048 RGS9O75916 674 aaPredicted RBP19.6■□□□□ 0.73
VARS-217ENST00000440048 PPIAL4GP0DN37 164 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 HAAOP46952 286 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 TGM4P49221 684 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 ADARB1P78563 741 aaKnown RBP19.6■□□□□ 0.73
VARS-217ENST00000440048 KLHL22Q53GT1 634 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 OGFRL1Q5TC84 451 aaPredicted RBP19.6■□□□□ 0.73
VARS-217ENST00000440048 TMEM244Q5VVB8 128 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 ZNF573Q86YE8 665 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 DHRSXQ8N5I4 330 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 ZNF418Q8TF45 676 aaPredicted RBP19.6■□□□□ 0.73
VARS-217ENST00000440048 ST8SIA4Q92187 359 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 UPRTQ96BW1 309 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 MYCBPQ99417 103 aaPredicted RBP19.6■□□□□ 0.73
VARS-217ENST00000440048 SLC6A7Q99884 636 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 ISG20L2Q9H9L3 353 aaKnown RBP19.6■□□□□ 0.73
VARS-217ENST00000440048 NUP50Q9UKX7 468 aa19.6■□□□□ 0.73
VARS-217ENST00000440048 A0A0A6YYJ9 748 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 J3QT63 122 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 SYNGR1O43759 233 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 VENTXO95231 258 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 TFF1P04155 84 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 CCR9P51686 369 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 UBE2V2Q15819 145 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 BTN2A1Q7KYR7 527 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 SYS1Q8N2H4 156 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 BPIFB2Q8N4F0 458 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 ANGPTL6Q8NI99 470 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 CNIH3Q8TBE1 160 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 C22orf15Q8WYQ4 148 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 TMIGD2Q96BF3 282 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 DNTTIP1Q9H147 329 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 NLKQ9UBE8 527 aa19.59■□□□□ 0.73
VARS-217ENST00000440048 ISG15P05161 165 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 FPR2P25090 351 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 FGF12P61328 243 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 IKZF1Q13422 519 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 C11orf91Q3C1V1 193 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 ZNF788Q6ZQV5 615 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 EGFL6Q8IUX8 553 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 POC1AQ8NBT0 407 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 TRMT10AQ8TBZ6 339 aaKnown RBP19.58■□□□□ 0.72
VARS-217ENST00000440048 NPRL2Q8WTW4 380 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 C10orf35Q96D05 121 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 ZNF488Q96MN9 340 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 GAFA1Q96PS6 74 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 CHST5Q9GZS9 411 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms