RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 LMX1BO60663 402 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 DHRS3O75911 302 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 PTBP3O95758 552 aaKnown RBP6.28□□□□□ -1.4
COPS3-203ENST00000439936 PAHP00439 452 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 GRPP07492 148 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 PIPP12273 146 aaPredicted RBP6.28□□□□□ -1.4
COPS3-203ENST00000439936 FAHP16930 419 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 HSPA13P48723 471 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 CCR9P51686 369 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 GBX2P52951 348 aaPredicted RBP6.28□□□□□ -1.4
COPS3-203ENST00000439936 LMO4P61968 165 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 ACTA2P62736 377 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 ACTG2P63267 376 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 SLC3A1Q07837 685 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 PRDX4Q13162 271 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 SNCBQ16143 134 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 SMUG1Q53HV7 270 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 OR2G6Q5TZ20 316 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 TMEM244Q5VVB8 128 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 PRAMEF6Q5VXH4 476 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 MOB3CQ70IA8 216 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 DOK3Q7L591 496 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 FAM220AQ7Z4H9 259 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 BIVMQ86UB2 503 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 MOGAT3Q86VF5 341 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 COMMD2Q86X83 199 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 C11orf53Q8IXP5 236 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 STX19Q8N4C7 294 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 SEMA6DQ8NFY4 1073 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 OR8S1Q8NH09 359 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 CLDND2Q8NHS1 167 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 ERGIC1Q969X5 290 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 RNF170Q96K19 258 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 CCDC140Q96MF4 163 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 RBM14Q96PK6 669 aaKnown RBP6.28□□□□□ -1.4
COPS3-203ENST00000439936 ADAT1Q9BUB4 502 aaKnown RBP6.28□□□□□ -1.4
COPS3-203ENST00000439936 PAPOLGQ9BWT3 736 aaKnown RBP6.28□□□□□ -1.4
COPS3-203ENST00000439936 ANKRD60Q9BZ19 345 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 NCOR1P1Q9H4R4 102 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 MOB1AQ9H8S9 216 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 FKBP14Q9NWM8 211 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 C14orf119Q9NWQ9 140 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 CNOT2Q9NZN8 540 aaKnown RBP6.28□□□□□ -1.4
COPS3-203ENST00000439936 PIGLQ9Y2B2 252 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 EXOSC1Q9Y3B2 195 aaKnown RBP6.28□□□□□ -1.4
COPS3-203ENST00000439936 WIPI2Q9Y4P8 454 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 PCDHGB5Q9Y5G0 923 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 NPTNQ9Y639 398 aa6.28□□□□□ -1.4
COPS3-203ENST00000439936 VPS13CQ709C8 3753 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 CSPG4Q6UVK1 2322 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 ZNF816-ZNF321PA0A0X1KG74 233 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 A0A1B0GVI7 797 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 CLDN25C9JDP6 229 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 OGG1O15527 345 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 SYT7O43581 403 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 TSPAN15O95858 294 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 CYB5R3P00387 301 aaPredicted RBP6.27□□□□□ -1.41
COPS3-203ENST00000439936 NRASP01111 189 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 ISG15P05161 165 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 CCL1P22362 96 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 C21orf33P30042 268 aaPredicted RBP6.27□□□□□ -1.41
COPS3-203ENST00000439936 IL2RGP31785 369 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 THBS2P35442 1172 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 CHN2P52757 468 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 KRTAP1-1Q07627 177 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 MZT1Q08AG7 82 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 ZNF181Q2M3W8 571 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 TMEM249Q2WGJ8 235 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 FAM76BQ5HYJ3 339 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 FAM201AQ5SY85 155 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 XAF1Q6GPH4 301 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 CLEC9AQ6UXN8 241 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 TMPRSS11AQ6ZMR5 421 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 ZNF826PQ6ZT77 177 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 Q71RC1 249 aaPredicted RBP6.27□□□□□ -1.41
COPS3-203ENST00000439936 PEG10Q86TG7 708 aaKnown RBP6.27□□□□□ -1.41
COPS3-203ENST00000439936 WDR86Q86TI4 376 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 LRRC28Q86X40 367 aaPredicted RBP6.27□□□□□ -1.41
COPS3-203ENST00000439936 FTMTQ8N4E7 242 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 KLHL36Q8N4N3 616 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 NANOGP1Q8N7R0 232 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 ZBTB8BQ8NAP8 495 aaPredicted RBP6.27□□□□□ -1.41
COPS3-203ENST00000439936 ZNF485Q8NCK3 441 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 CCDC54Q8NEL0 328 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 OR1M1Q8NGA1 313 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 OR5A2Q8NGI9 324 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 OR10AC1Q8NH08 325 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 OR5P3Q8WZ94 311 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 TIMD4Q96H15 378 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 HIST1H2AAQ96QV6 131 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 MICU1Q9BPX6 476 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 UQCC2Q9BRT2 126 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 FGF23Q9GZV9 251 aaPredicted RBP6.27□□□□□ -1.41
COPS3-203ENST00000439936 NARFLQ9H6Q4 476 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 TMEM165Q9HC07 324 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 BABAM2Q9NXR7 383 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 SCN3BQ9NY72 215 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 RAB26Q9ULW5 256 aa6.27□□□□□ -1.41
COPS3-203ENST00000439936 SIRT4Q9Y6E7 314 aaPredicted RBP6.27□□□□□ -1.41
COPS3-203ENST00000439936 ZNF469Q96JG9 3925 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms