RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 UNC119Q13432 240 aa10.38□□□□□ -0.75
SMPD4-209ENST00000439886 CT45A2Q5DJT8 189 aa10.38□□□□□ -0.75
SMPD4-209ENST00000439886 SGPP2Q8IWX5 399 aa10.38□□□□□ -0.75
SMPD4-209ENST00000439886 OR1N1Q8NGS0 311 aa10.38□□□□□ -0.75
SMPD4-209ENST00000439886 FAM60AQ9NP50 221 aa10.38□□□□□ -0.75
SMPD4-209ENST00000439886 SERINC1Q9NRX5 453 aa10.38□□□□□ -0.75
SMPD4-209ENST00000439886 NOTCH4Q99466 2003 aa10.38□□□□□ -0.75
SMPD4-209ENST00000439886 DOCK8Q8NF50 2099 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 FAM221AA4D161 298 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 ZNF850A8MQ14 1090 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 K7EQS6 105 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 CBR3O75828 277 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 FCGR3AP08637 254 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 HKR1P10072 659 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 CEACAM8P31997 349 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 THBS4P35443 961 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 OR3A4PP47883 348 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 RPL27P61353 136 aaKnown RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 POU3F1Q03052 451 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 KIR2DS3Q14952 304 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 HMGN3Q15651 99 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 LRP11Q86VZ4 500 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 CRIPAKQ8N1N5 446 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 SMIM8Q96KF7 97 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 PRRX2Q99811 253 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 NXF5Q9H1B4 397 aaKnown RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 CERS4Q9HA82 394 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 LYRM4Q9HD34 91 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 RAB18Q9NP72 206 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 VDAC3Q9Y277 283 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 RAMP1O60894 148 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 IL2RAP01589 272 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 FOXK1P85037 733 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 INSM1Q01101 510 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 GPM6BQ13491 265 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 ISXQ2M1V0 245 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 C10orf91Q5T1B1 145 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 DNM1P46Q6ZS02 220 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 NUP54Q7Z3B4 507 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 BATF2Q8N1L9 274 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 TMEM217Q8N7C4 229 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 SLC39A7Q92504 469 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 MRPL24Q96A35 216 aaKnown RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 HDAC8Q9BY41 377 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 SLC26A1Q9H2B4 701 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 R4GMQ9 66 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 PHF3Q92576 2039 aaKnown RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 IGHEP01854 428 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 CRYABP02511 175 aaKnown RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 TRGC2P03986 189 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 FGF7P21781 194 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 OPRM1P35372 400 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 RAB38P57729 211 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 ATG4DQ86TL0 474 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 ZNF610Q8N9Z0 462 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 NT5CQ8TCD5 201 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 AQP3Q92482 292 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 VSTM2LQ96N03 204 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 ZNF2Q9BSG1 426 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 SLC35B3Q9H1N7 401 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 B3GALT5Q9Y2C3 310 aa10.37□□□□□ -0.75
SMPD4-209ENST00000439886 TMEM184BQ9Y519 407 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-209ENST00000439886 B4DGG1 531 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 CD5P06127 495 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 TLE4Q04727 773 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 RIPPLY2Q5TAB7 128 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 BTNL8Q6UX41 500 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 LINC00114Q6XXX2 140 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 ZNF705AQ6ZN79 300 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-209ENST00000439886 HOGA1Q86XE5 327 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 CATSPERDQ86XM0 798 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 TWSG1Q9GZX9 223 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 PARP11Q9NR21 331 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 FAM186AA6NE01 2351 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 TGIF2-C20orf24A0A0A6YYL0 155 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 LINC01553A4QN01 128 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 TMEM238C9JI98 176 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 ZNF587BE7ETH6 402 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 NDUFS8O00217 210 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 FKTNO75072 461 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 CSRP1P21291 193 aaKnown RBP10.36□□□□□ -0.75
SMPD4-209ENST00000439886 RPS4XP62701 263 aaKnown RBP10.36□□□□□ -0.75
SMPD4-209ENST00000439886 OGFOD3Q6PK18 319 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 SPRED2Q7Z698 418 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 TMEM123Q8N131 208 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 SLC24A4Q8NFF2 622 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 TMEM230Q96A57 120 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 ZNF524Q96C55 264 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 URM1Q9BTM9 101 aaKnown RBP10.36□□□□□ -0.75
SMPD4-209ENST00000439886 FBRSQ9HAH7 460 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 DNAJC4Q9NNZ3 241 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 NXT1Q9UKK6 140 aaKnown RBP10.36□□□□□ -0.75
SMPD4-209ENST00000439886 TIMM10BQ9Y5J6 103 aa10.36□□□□□ -0.75
SMPD4-209ENST00000439886 CXorf51AA0A1B0GTR3 108 aa10.35□□□□□ -0.75
SMPD4-209ENST00000439886 WIPF3A6NGB9 483 aa10.35□□□□□ -0.75
SMPD4-209ENST00000439886 H0YL77 283 aa10.35□□□□□ -0.75
SMPD4-209ENST00000439886 CTSEP14091 401 aa10.35□□□□□ -0.75
SMPD4-209ENST00000439886 PRSS12P56730 875 aa10.35□□□□□ -0.75
SMPD4-209ENST00000439886 DMWDQ09019 674 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms