RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 VSIRQ9H7M9 311 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 FKRPQ9H9S5 495 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 SLC7A10Q9NS82 523 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 RIMS3Q9UJD0 308 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 HSPB11Q9Y547 144 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 PLEKHG1Q9ULL1 1385 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 KDM5BQ9UGL1 1544 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 CACNA1FO60840 1977 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 PRXQ9BXM0 1461 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 A0A1W2PP64 1363 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 RTL9Q8NET4 1388 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 IGKV1D-8A0A087WSZ0 117 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 IGLV5-39A0A0G2JS06 123 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 LOC100131303A0A0U1RQF7 123 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 A6NDN8 102 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 FAM159BA6NKW6 160 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 TRIM49D1C9J1S8 452 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF587BE7ETH6 402 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 LOC110117498-PIK3R3F6TDL0 507 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 F6UB75 175 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 RGS14O43566 566 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 SOX14O95416 240 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 HPRT1P00492 218 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 THY1P04216 161 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 SERPINA7P05543 415 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 FBP1P09467 338 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR9G9P0C7N8 305 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 LINC00271P0C7V0 271 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 PGA4P0DJD7 388 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 PGA3P0DJD8 388 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 PGA5P0DJD9 388 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 PLA2G2AP14555 144 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 CD1EP15812 388 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 OGNP20774 298 aaKnown RBP2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 HIST1H1TP22492 207 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 S100A7P31151 101 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 AKR1C3P42330 323 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 RAB2AP61019 212 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 RAP1BP61224 184 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 HERV-K104P61576 105 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 NAA20P61599 178 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 NUTF2P61970 127 aaKnown RBP2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 SLC7A9P82251 487 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 IFITM2Q01629 132 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 SMAGPQ0VAQ4 97 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 KCNJ11Q14654 390 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR7A5Q15622 319 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 SMIM21Q3B7S5 101 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 TMEM30BQ3MIR4 351 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 TRMT12Q53H54 448 aaKnown RBP2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 ACSBG2Q5FVE4 666 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 FAM78BQ5VT40 261 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 ELP2Q6IA86 826 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 TNFAIP8L2Q6P589 184 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 SMARCD3Q6STE5 483 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 TMEM205Q6UW68 189 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 GSG1LQ6UXU4 331 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 RASSF6Q6ZTQ3 369 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 HOGA1Q86XE5 327 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 ANGPTL5Q86XS5 388 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 CADM2Q8N3J6 435 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 ST6GALNAC3Q8NDV1 305 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 PRSS33Q8NF86 280 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR1L8Q8NGR8 309 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR6N1Q8NGY5 312 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR13G1Q8NGZ3 307 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR2T6Q8NHC8 308 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 GRPEL2Q8TAA5 225 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 SLC37A2Q8TED4 501 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 RDH5Q92781 318 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 TAMM41Q96BW9 452 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 PAGE5Q96GU1 130 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 TMEM80Q96HE8 168 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 URB1-AS1Q96HZ7 61 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 BTF3L4Q96K17 158 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 PSMB7Q99436 277 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 KIFC1Q9BW19 673 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 TAPBPLQ9BX59 468 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 RNF167Q9H6Y7 350 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 NMNAT1Q9HAN9 279 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 TPT1P8Q9HAU6 139 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 EXOSC4Q9NPD3 245 aaKnown RBP2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 THYN1Q9P016 225 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 ARMCX1Q9P291 453 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 OPTCQ9UBM4 332 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 SS18L2Q9UHA2 77 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 NEU3Q9UQ49 428 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 UTP11Q9Y3A2 253 aaKnown RBP2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 SELENOKQ9Y6D0 94 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 POGZQ7Z3K3 1410 aa2.93□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF518AQ6AHZ1 1483 aa2.92□□□□□ -1.94
HMGB1P12-201ENST00000438594 EXOC1LA0A1B0GW35 172 aa2.92□□□□□ -1.94
HMGB1P12-201ENST00000438594 A0A1B0GWB2 263 aa2.92□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF705EA8MWA4 302 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P12-201ENST00000438594 MANBAO00462 879 aa2.92□□□□□ -1.94
HMGB1P12-201ENST00000438594 DLEU1O43261 78 aa2.92□□□□□ -1.94
HMGB1P12-201ENST00000438594 PFDN1O60925 122 aa2.92□□□□□ -1.94
HMGB1P12-201ENST00000438594 SULT1C4O75897 302 aa2.92□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR2J2O76002 312 aa2.92□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR7C1O76099 320 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms