RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 TPRG1LQ5T0D9 272 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 PRAMEF20Q5VT98 475 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 TMEM215Q68D42 235 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 NANOGP8Q6NSW7 305 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 ARL9Q6T311 187 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 TMEM25Q86YD3 366 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 BBS7Q8IWZ6 715 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 PRSS58Q8IYP2 241 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 DAW1Q8N136 415 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 PRELID2Q8N945 189 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 OR5W2Q8NH69 310 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 FAM81AQ8TBF8 368 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 MRGPRFQ96AM1 343 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 PKMYT1Q99640 499 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 TEKT3Q9BXF9 490 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 FAM192AQ9GZU8 254 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 SAV1Q9H4B6 383 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 TMEM185BQ9H7F4 350 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 SYNDIG1Q9H7V2 258 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 NRBP2Q9NSY0 501 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 CCDC59Q9P031 241 aaKnown RBP1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZNRD1Q9P1U0 126 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 CTSFQ9UBX1 484 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 VANGL2Q9ULK5 521 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 DDX19BQ9UMR2 479 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 ST3GAL6Q9Y274 331 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 FBN1P35555 2871 aaKnown RBP1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 NUP210LQ5VU65 1888 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 CUBNO60494 3623 aa1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 SPTBN1Q01082 2364 aaKnown RBP1.62□□□□□ -2.15
HMGB1P31-201ENST00000437242 HIVEP3Q5T1R4 2406 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 VPS13CQ709C8 3753 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 A0A1B0GTQ1 180 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 A0A1W2PP18 115 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 C10orf142B7Z368 130 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 NUPL2O15504 423 aaKnown RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 RRP8O43159 456 aaKnown RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 HUS1O60921 280 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 FKBP6O75344 327 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 ENTPD5O75356 428 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 LDOC1O95751 146 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 SERPINE2P07093 398 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 KRT7P08729 469 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 MRPL3P09001 348 aaKnown RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 ACSM4P0C7M7 580 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 MYL2P10916 166 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 SYKP43405 635 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 RAB9AP51151 201 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 VSX2P58304 361 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 KRTAP12-4P60329 112 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 PSMC5P62195 406 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 ESRRGP62508 458 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 SELENBP1Q13228 472 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 CUL2Q13617 745 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 PDGFRLQ15198 375 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 CHRNA6Q15825 494 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZNF726P1Q15940 193 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 LY6EQ16553 131 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZSCAN26Q16670 478 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 PTPN20Q4JDL3 420 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 Q5W150 140 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 KCTD16Q68DU8 428 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 FBXW12Q6X9E4 464 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 BZW1Q7L1Q6 419 aaKnown RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 CMC1Q7Z7K0 106 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 SLC25A45Q8N413 288 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 WFDC5Q8TCV5 224 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 C8orf44Q96CB5 159 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 PDXPQ96GD0 296 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 MSANTD3Q96H12 275 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 XPO6Q96QU8 1125 aaKnown RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 OR5B12Q96R08 314 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 GABRG3Q99928 467 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 MICU1Q9BPX6 476 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 NEUROG2Q9H2A3 272 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 EXO5Q9H790 373 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 GEMIN7Q9H840 131 aaKnown RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZNF430Q9H8G1 570 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 DDX19AQ9NUU7 478 aaKnown RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 LYARQ9NX58 379 aaKnown RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZNF222Q9UK12 451 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 SLC17A4Q9Y2C5 497 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 YTHDF2Q9Y5A9 579 aaKnown RBP1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 PTPRJQ12913 1337 aa1.61□□□□□ -2.15
HMGB1P31-201ENST00000437242 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 KNTC1P50748 2209 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 TACC2O95359 2948 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 SPG11Q96JI7 2443 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 CHD5Q8TDI0 1954 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 TRAV19A0A0A6YYK7 116 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 A0A0U1RQV1 116 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 TMEM223A0PJW6 202 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 A6NDN8 102 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 OR2AG2A6NM03 316 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZNF705GA8MUZ8 300 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 LSM1O15116 133 aaKnown RBP1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 SLC16A4O15374 487 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 COCHO43405 550 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 EIF4E2O60573 245 aaKnown RBP1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 CLDN11O75508 207 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms