RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 BPNT1O95861 308 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 UBBP0CG47 229 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 NAT2P11245 290 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 POU3F4P49335 361 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 MZT1Q08AG7 82 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 FAM76BQ5HYJ3 339 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 GLIPR1L1Q6UWM5 242 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 ZNF573Q86YE8 665 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 CMTM3Q96MX0 182 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 C14orf119Q9NWQ9 140 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 GHRLQ9UBU3 117 aa19.58■□□□□ 0.72
CPSF4-204ENST00000436336 A6NNC1 897 aa19.57■□□□□ 0.72
CPSF4-204ENST00000436336 HAAOP46952 286 aa19.57■□□□□ 0.72
CPSF4-204ENST00000436336 ZNF81P51508 661 aa19.57■□□□□ 0.72
CPSF4-204ENST00000436336 CALHM1Q8IU99 346 aa19.57■□□□□ 0.72
CPSF4-204ENST00000436336 SAMD12Q8N8I0 201 aa19.57■□□□□ 0.72
CPSF4-204ENST00000436336 OR2Z1Q8NG97 314 aa19.57■□□□□ 0.72
CPSF4-204ENST00000436336 S100A13Q99584 98 aa19.57■□□□□ 0.72
CPSF4-204ENST00000436336 MIXL1Q9H2W2 232 aa19.57■□□□□ 0.72
CPSF4-204ENST00000436336 B9A039 149 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 HPGDSO60760 199 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 TMEM225BP0DP42 221 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 PDZK1IP1Q13113 114 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 LAX1Q8IWV1 398 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 GTF3AQ92664 365 aaKnown RBP19.56■□□□□ 0.72
CPSF4-204ENST00000436336 OR51I2Q9H344 312 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 ADAM30Q9UKF2 790 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 ZDHHC8Q9ULC8 765 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 CHD3Q12873 2000 aaKnown RBP19.56■□□□□ 0.72
CPSF4-204ENST00000436336 LRP5LA4QPB2 252 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 F5H5P2 479 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 ASCL4Q6XD76 172 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 WDR86Q86TI4 376 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 ZNF611Q8N823 705 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 ZSCAN4Q8NAM6 433 aaPredicted RBP19.56■□□□□ 0.72
CPSF4-204ENST00000436336 PXT1Q8NFP0 134 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 FBXW5Q969U6 566 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 ELMOD3Q96FG2 381 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 C1orf147Q96MC9 270 aaPredicted RBP19.56■□□□□ 0.72
CPSF4-204ENST00000436336 WDFY2Q96P53 400 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 ING4Q9UNL4 249 aa19.56■□□□□ 0.72
CPSF4-204ENST00000436336 TMEM272A0A1B0GTI8 110 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 M0R233 179 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 SPRY1O43609 319 aaPredicted RBP19.55■□□□□ 0.72
CPSF4-204ENST00000436336 PLATP00750 562 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 CD200P41217 278 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 MAB21L1Q13394 359 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 UBE2NLQ5JXB2 153 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 C1QL2Q7Z5L3 287 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 FBXL14Q8N1E6 418 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 MUC15Q8N387 334 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 CEP19Q96LK0 163 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 DIRC2Q96SL1 478 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 PKIBQ9C010 78 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 FBLN5Q9UBX5 448 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 ROS1P08922 2347 aa19.55■□□□□ 0.72
CPSF4-204ENST00000436336 RAI1Q7Z5J4 1906 aaPredicted RBP19.54■□□□□ 0.72
CPSF4-204ENST00000436336 LDLRAD4O15165 306 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 SPRY3O43610 288 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 CLDN1O95832 211 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 ZNF154Q13106 437 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 HAGHLQ6PII5 290 aaPredicted RBP19.54■□□□□ 0.72
CPSF4-204ENST00000436336 OR2W3Q7Z3T1 314 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 LRRC28Q86X40 367 aaPredicted RBP19.54■□□□□ 0.72
CPSF4-204ENST00000436336 SAXO1Q8IYX7 474 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 PTX4Q96A99 478 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 METTL9Q9H1A3 318 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 KCNK15Q9H427 330 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 ABCA4P78363 2273 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 ANGPTL7O43827 346 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 APOA1P02647 267 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 ADH4P08319 380 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 VSIG8P0DPA2 414 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 MPZP25189 248 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 TNFSF8P32971 234 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 QRFPP83859 136 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 MST1LQ2TV78 715 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 SLC25A26Q70HW3 274 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 MKXQ8IYA7 352 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 CELF2-AS1Q8N7Q2 184 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 OR51F2Q8NH61 342 aa19.54■□□□□ 0.72
CPSF4-204ENST00000436336 ARFGEF3Q5TH69 2177 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 C17orf100A8MU93 164 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 TMEM14DPA8MWL7 114 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 J3QT63 122 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 HS3ST1O14792 307 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 ZNF780AO75290 641 aaPredicted RBP19.53■□□□□ 0.72
CPSF4-204ENST00000436336 CYB5AP00167 134 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 IGHV1-46P01743 117 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 ELK1P19419 428 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 ART1P52961 327 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 IL24Q13007 206 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 GPR176Q14439 515 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 SWI5Q1ZZU3 235 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 SCCPDHQ8NBX0 429 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 KCNG3Q8TAE7 436 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 SLC25A38Q96DW6 304 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 CST11Q9H112 138 aa19.53■□□□□ 0.72
CPSF4-204ENST00000436336 ELL3Q9HB65 397 aaPredicted RBP19.53■□□□□ 0.72
CPSF4-204ENST00000436336 IL36GQ9NZH8 169 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms