RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 HHLA2Q9UM44 414 aa15.34■□□□□ 0.05
HLA-F-220ENST00000434407 CUBNO60494 3623 aa15.34■□□□□ 0.05
HLA-F-220ENST00000434407 TMEM212A6NML5 194 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 C3orf80F5H4A9 247 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 H3BSH0 61 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 NDUFA2O43678 99 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 FOXH1O75593 365 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 ZFPL1O95159 310 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 CCDC159P0C7I6 412 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 MYL12AP19105 171 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 MYF6P23409 242 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 UBE2V2Q15819 145 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 OR2G6Q5TZ20 316 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 SFRP4Q6FHJ7 346 aaPredicted RBP15.33■□□□□ 0.04
HLA-F-220ENST00000434407 LYPD2Q6UXB3 125 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 ZNF841Q6ZN19 808 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 UTS2BQ765I0 119 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 FAM90A1Q86YD7 464 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 BOLLQ8N9W6 283 aaKnown RBP15.33■□□□□ 0.04
HLA-F-220ENST00000434407 DEFB108BQ8NET1 73 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 BPIFB6Q8NFQ5 453 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 OR10AC1Q8NH08 325 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 PP6455Q8WZ26 134 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 AQP3Q92482 292 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 ADAT3Q96EY9 351 aaPredicted RBP15.33■□□□□ 0.04
HLA-F-220ENST00000434407 NEIL1Q96FI4 390 aaPredicted RBP15.33■□□□□ 0.04
HLA-F-220ENST00000434407 TECTBQ96PL2 329 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 PLEKHA1Q9HB21 404 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 KAAG1Q9UBP8 84 aa15.33■□□□□ 0.04
HLA-F-220ENST00000434407 RHBDL1O75783 438 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 RPS2P15880 293 aaKnown RBP15.32■□□□□ 0.04
HLA-F-220ENST00000434407 GATA3P23771 443 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 HSPA13P48723 471 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 GTF2A1P52655 376 aaPredicted RBP15.32■□□□□ 0.04
HLA-F-220ENST00000434407 LCN2P80188 198 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 CHRFAM7AQ494W8 412 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 ESCO2Q56NI9 601 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 XAF1Q6GPH4 301 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 RPL22L1Q6P5R6 122 aaKnown RBP15.32■□□□□ 0.04
HLA-F-220ENST00000434407 IZUMO2Q6UXV1 221 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 ZNF573Q86YE8 665 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 ZNF676Q8N7Q3 588 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 OR51A4Q8NGJ6 313 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 C12orf43Q96C57 262 aaKnown RBP15.32■□□□□ 0.04
HLA-F-220ENST00000434407 PDCD1LG2Q9BQ51 273 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 SHARPINQ9H0F6 387 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 BABAM2Q9NXR7 383 aa15.32■□□□□ 0.04
HLA-F-220ENST00000434407 ATRQ13535 2644 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 SLC1A7O00341 560 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 OGG1O15527 345 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 GATBO75879 557 aaKnown RBP15.31■□□□□ 0.04
HLA-F-220ENST00000434407 MPZP25189 248 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 C21orf33P30042 268 aaPredicted RBP15.31■□□□□ 0.04
HLA-F-220ENST00000434407 PAX2Q02962 417 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 MED21Q13503 144 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 CDK5R1Q15078 307 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 MICBQ29980 383 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 RNLSQ5VYX0 342 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 AHSA2Q719I0 299 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 NLRC3Q7RTR2 1065 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 OR8B3Q8NGG8 313 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 OR5AK2Q8NH90 309 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 ZNF671Q8TAW3 534 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 DACT3Q96B18 629 aaPredicted RBP15.31■□□□□ 0.04
HLA-F-220ENST00000434407 OR8B2Q96RD0 313 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 SSBP3Q9BWW4 388 aaPredicted RBP15.31■□□□□ 0.04
HLA-F-220ENST00000434407 ERVK-18Q9QC07 812 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 CTSZQ9UBR2 303 aa15.31■□□□□ 0.04
HLA-F-220ENST00000434407 A0A0G2JMP0 313 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 TRBV2A0A0J9YWF9 115 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 A0A0X1KG70 313 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 TRAPPC2LH3BP13 241 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 J3QLI3 93 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 J3QT63 122 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 AKR7A2O43488 359 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 NOS1APO75052 506 aaPredicted RBP15.3■□□□□ 0.04
HLA-F-220ENST00000434407 LALBAP00709 142 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 SERPINA3P01011 423 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 GYPAP02724 150 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 ACAA1P09110 424 aaPredicted RBP15.3■□□□□ 0.04
HLA-F-220ENST00000434407 VHLP40337 213 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 PITPNBP48739 271 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 FUT6P51993 359 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 ATPAF1Q5TC12 328 aaPredicted RBP15.3■□□□□ 0.04
HLA-F-220ENST00000434407 WDR25Q64LD2 544 aaPredicted RBP15.3■□□□□ 0.04
HLA-F-220ENST00000434407 HAGHLQ6PII5 290 aaPredicted RBP15.3■□□□□ 0.04
HLA-F-220ENST00000434407 DNAAF1Q8NEP3 725 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 OR4M2Q8NGB6 313 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 FGGYQ96C11 551 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 SEH1LQ96EE3 360 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 BEX2Q9BXY8 128 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 TMPRSS13Q9BYE2 586 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 COMMD4Q9H0A8 199 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 WDR13Q9H1Z4 485 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 CHCHD3Q9NX63 227 aaKnown RBP15.3■□□□□ 0.04
HLA-F-220ENST00000434407 SLC7A11Q9UPY5 501 aa15.3■□□□□ 0.04
HLA-F-220ENST00000434407 SIRT4Q9Y6E7 314 aaPredicted RBP15.3■□□□□ 0.04
HLA-F-220ENST00000434407 IGKV1-27A0A075B6S5 117 aa15.29■□□□□ 0.04
HLA-F-220ENST00000434407 IGHV3OR15-7A0A075B7D8 119 aa15.29■□□□□ 0.04
HLA-F-220ENST00000434407 IGKV1-9A0A0C4DH69 117 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms