RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 H1FOOQ8IZA3 346 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 CLRN3Q8NCR9 226 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 OR13C9Q8NGT0 318 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF721Q8TF20 911 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ST6GAL2Q96JF0 529 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TM2D1Q9BX74 207 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 PECRQ9BY49 303 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 SLC5A7Q9GZV3 580 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 GAL3ST2Q9H3Q3 398 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TUBA4BQ9H853 241 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 DECR2Q9NUI1 292 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 HCFC1P51610 2035 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 K7EQS6 105 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 HRASP01112 189 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 OPRM1P35372 400 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 PTGDSP41222 190 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 GNG3P63215 75 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 RPS27LQ71UM5 84 aaKnown RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 FAM89BQ8N5H3 189 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF615Q8N8J6 731 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 OR5A2Q8NGI9 324 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 C2orf50Q96LR7 162 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 LRRC3BQ96PB8 259 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 PBOV1Q9GZY1 135 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 GPR52Q9Y2T5 361 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TNRC6BQ9UPQ9 1833 aaKnown RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 STAB1Q9NY15 2570 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 FNDC10F2Z333 226 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 K7ESM1 405 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 FCMRO60667 390 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 AKR1C2P52895 323 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 EXOSC7Q15024 291 aaKnown RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ST7LQ8TDW4 575 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 PRSS27Q9BQR3 290 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TBC1D24Q9ULP9 559 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TRAV27A0A087WT01 109 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 A0A1B0GTI1 187 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 OR5H14A6NHG9 310 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 NKX6-3A6NJ46 265 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 EPPINO95925 133 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 PRSS56P0CW18 603 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 RPS18P62269 152 aaKnown RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 CCL7P80098 99 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 HFEQ30201 348 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TSLPQ969D9 159 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ADIPOR1Q96A54 375 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 PACRGQ96M98 296 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 GPR137Q96N19 417 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 NEUROG3Q9Y4Z2 214 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 A8MX80 341 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ICOSLGO75144 302 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 LINC00271P0C7V0 271 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 SRP9P49458 86 aaKnown RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 CAV2P51636 162 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 BIDP55957 195 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ABLIM2Q6H8Q1 611 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 S100PBPQ96BU1 408 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF501Q96CX3 271 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ATP6V0BQ99437 205 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 SOX21Q9Y651 276 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 FLNCQ14315 2725 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 TRBV9A0A0B4J1U6 114 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 GCM2O75603 506 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 PDGFAP04085 211 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 LYPD4Q6UWN0 246 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 FOXL2NBQ6ZUU3 175 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 NLRC3Q7RTR2 1065 aa3.34□□□□□ -1.87
SHPRH-205ENST00000433355 RTN4IP1Q8WWV3 396 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF845Q96IR2 970 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF701Q9NV72 531 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 MRM2Q9UI43 246 aaKnown RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 GDF2Q9UK05 429 aaPredicted RBP3.34□□□□□ -1.87
SHPRH-205ENST00000433355 USP24Q9UPU5 2620 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 M0R036 132 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 SDCBPO00560 298 aaPredicted RBP3.34□□□□□ -1.88
SHPRH-205ENST00000433355 FABP7O15540 132 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 OR8U8P0C7N1 319 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 SLC2A1P11166 492 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 PTGFRP43088 359 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 FAM3BP58499 235 aaPredicted RBP3.34□□□□□ -1.88
SHPRH-205ENST00000433355 IAH1Q2TAA2 248 aaPredicted RBP3.34□□□□□ -1.88
SHPRH-205ENST00000433355 ASCL4Q6XD76 172 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 ETV3LQ6ZN32 361 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 ZDHHC23Q8IYP9 409 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF519Q8TB69 540 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 OR2J1Q9GZK6 312 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 HRASLSQ9HDD0 168 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 LYRM2Q9NU23 88 aaPredicted RBP3.34□□□□□ -1.88
SHPRH-205ENST00000433355 SERGEFQ9UGK8 458 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 TP53TG5Q9Y2B4 290 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 TMEM30CPA0ZSE6 113 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 J3QT63 122 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 PRKACAP17612 351 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 GZMHP20718 246 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 SHC1P29353 583 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 SCGB2B2Q4G0G5 96 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 AVPI1Q5T686 147 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 ACSM5Q6NUN0 579 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 GLIPR1L1Q6UWM5 242 aa3.34□□□□□ -1.88
SHPRH-205ENST00000433355 LRRC18Q8N456 261 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms