RNA–Protein interactions for RNA: ENST00000430086.1

CCDC88A-206, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 3

Gene CCDC88A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-206ENST00000430086 NELFBQ8WX92 580 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 PTH2Q96A98 100 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 MRAP2Q96G30 205 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 FCRL1Q96LA6 429 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 RDH12Q96NR8 316 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 RBP7Q96R05 134 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 OR2M4Q96R27 311 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 STACQ99469 402 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 TEAD3Q99594 435 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 GABARAPL3Q9BY60 117 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 SH2D2AQ9NP31 389 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 MYOZ1Q9NP98 299 aaPredicted RBP3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 MED4Q9NPJ6 270 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 FAM49BQ9NUQ9 324 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 GUCA1BQ9UMX6 200 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 PHF3Q92576 2039 aaKnown RBP3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 C9orf84Q5VXU9 1444 aa3.7□□□□□ -1.82
CCDC88A-206ENST00000430086 ZCCHC6Q5VYS8 1495 aaKnown RBP3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 OR2AT4A6NND4 320 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 CCRL2O00421 344 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 MYL12BO14950 172 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 RTL8CO15255 209 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 FGF16O43320 207 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 MMP7P09237 267 aaPredicted RBP3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 C8orf88P0DMB2 117 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 UGT2B7P16662 529 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 IL5RAQ01344 420 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 MGAT3Q09327 533 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 FZD2Q14332 565 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 KIAA0087Q14695 138 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 TOMM34Q15785 309 aaPredicted RBP3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 CEACAM21Q3KPI0 293 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 AVPI1Q5T686 147 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 UGT2A3Q6UWM9 527 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 FAM220AQ7Z4H9 259 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 HS3ST5Q8IZT8 346 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 C2orf73Q8N5S3 287 aaPredicted RBP3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 NPWQ8N729 165 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 OR2AE1Q8NHA4 323 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 C7orf33Q8WU49 177 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 HAUS1Q96CS2 278 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 DDIT4LQ96D03 193 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 SMIM19Q96E16 107 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 SLC35E1Q96K37 410 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 KCTD7Q96MP8 289 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 Q96MT0 163 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 RNF145Q96MT1 663 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 TMEM56Q96MV1 263 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 ZNF285Q96NJ3 590 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 GPR22Q99680 433 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 ARHGDIGQ99819 225 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 C20orf144Q9BQM9 153 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 DIABLOQ9NR28 239 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 CLCF1Q9UBD9 225 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 ANXA10Q9UJ72 324 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 SNX10Q9Y5X0 201 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 EVC2Q86UK5 1308 aa3.69□□□□□ -1.82
CCDC88A-206ENST00000430086 RLFQ13129 1914 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 E5RI56 91 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 F5H768 121 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 MAGEB4O15481 346 aaPredicted RBP3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 TGOLN2O43493 480 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 DENRO43583 198 aaKnown RBP3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 SEMA3DO95025 777 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 LYPLA2O95372 231 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 ISG15P05161 165 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 PCCAP05165 728 aaPredicted RBP3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 ICAM2P13598 275 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 IDH2P48735 452 aaKnown RBP3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 RPS23P62266 143 aaKnown RBP3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 ARF6P62330 175 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 TSPAN31Q12999 210 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 MLLT11Q13015 90 aaPredicted RBP3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 NAB1Q13506 487 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 SPA17Q15506 151 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 CLEC12BQ2HXU8 276 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 TBC1D28Q2M2D7 210 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 SLC25A35Q3KQZ1 300 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 CDNFQ49AH0 187 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 TFDP3Q5H9I0 405 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 DNM1P34Q6PK57 102 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 TRAPPC5Q8IUR0 188 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 STPG2Q8N412 459 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 OR10G9Q8NGN4 311 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 OR1S1Q8NH92 325 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 RGP1Q92546 391 aaPredicted RBP3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 UCN3Q969E3 161 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 SEH1LQ96EE3 360 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 GALNT14Q96FL9 552 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 SDHCQ99643 169 aaPredicted RBP3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 METTL9Q9H1A3 318 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 DEFB127Q9H1M4 99 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 LHX5Q9H2C1 402 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 UGT1A7Q9HAW7 530 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 UGT1A8Q9HAW9 530 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 SLC2A9Q9NRM0 540 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 STOML2Q9UJZ1 356 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 SIGLEC9Q9Y336 463 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 LRRC42Q9Y546 428 aa3.68□□□□□ -1.82
CCDC88A-206ENST00000430086 IGHV3OR16-9A0A0B4J2B5 98 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms