RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CAV3P56539 151 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 MFGE8Q08431 387 aaPredicted RBP13.99□□□□□ -0.17
TRIM39-209ENST00000428728 ZNF829Q3KNS6 432 aaPredicted RBP13.99□□□□□ -0.17
TRIM39-209ENST00000428728 CEACAM21Q3KPI0 293 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 DNAL1Q4LDG9 190 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 HAGHLQ6PII5 290 aaPredicted RBP13.99□□□□□ -0.17
TRIM39-209ENST00000428728 Q6ZSV7 163 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 MOB3CQ70IA8 216 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 FAM185AQ8N0U4 392 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 ZNRF1Q8ND25 227 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 NPRL2Q8WTW4 380 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 DUS3LQ96G46 650 aaKnown RBP13.99□□□□□ -0.17
TRIM39-209ENST00000428728 TEAD3Q99594 435 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 MROQ9BYG7 248 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 OR51I2Q9H344 312 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 PIGLQ9Y2B2 252 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 TCRBV3S1A0A5B6 114 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 OR5B21A6NL26 309 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 M0R1W7 72 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 TIMM23O14925 209 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 GSC2O15499 205 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 PRKYO43930 277 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 RIDAP52758 137 aaKnown RBP13.98□□□□□ -0.17
TRIM39-209ENST00000428728 CRISP1P54107 249 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 PROK1P58294 105 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 RIPPLY1Q0D2K3 151 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 PDLIM3Q53GG5 364 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-209ENST00000428728 NCR3LG1Q68D85 454 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 ZNF679Q8IYX0 411 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 DNAJC9Q8WXX5 260 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 AQP3Q92482 292 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 TNFRSF14Q92956 283 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 PPP1R14AQ96A00 147 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 OR8B4Q96RC9 309 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 CNN2Q99439 309 aaKnown RBP13.98□□□□□ -0.17
TRIM39-209ENST00000428728 METTL8Q9H825 291 aaKnown RBP13.98□□□□□ -0.17
TRIM39-209ENST00000428728 NUFIP1Q9UHK0 495 aaKnown RBP13.98□□□□□ -0.17
TRIM39-209ENST00000428728 ZNF222Q9UK12 451 aa13.98□□□□□ -0.17
TRIM39-209ENST00000428728 ACOD1A6NK06 481 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 H0YAE9 185 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 ANGPTL7O43827 346 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 DAPP51397 102 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 BLMHQ13867 455 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 DEGS2Q6QHC5 323 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 BCDIN3DQ7Z5W3 292 aaKnown RBP13.97□□□□□ -0.17
TRIM39-209ENST00000428728 ZSCAN4Q8NAM6 433 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-209ENST00000428728 OR5A2Q8NGI9 324 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 ZNF671Q8TAW3 534 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 ASB17Q8WXJ9 295 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 UBE2FQ969M7 185 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 ZNF488Q96MN9 340 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 TCF7L1Q9HCS4 588 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 POMPQ9Y244 141 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 MAB21L2Q9Y586 359 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 TMEM14AQ9Y6G1 99 aa13.97□□□□□ -0.17
TRIM39-209ENST00000428728 LOC110117498-PIK3R3F6TDL0 507 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 MAGEB4O15481 346 aaPredicted RBP13.96□□□□□ -0.17
TRIM39-209ENST00000428728 DHRS3O75911 302 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 CLPXO76031 633 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 IGLV3-1P01715 115 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 TTRP02766 147 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 ATP6V1B1P15313 513 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 CEBPDP49716 269 aaPredicted RBP13.96□□□□□ -0.17
TRIM39-209ENST00000428728 UBE2E1P51965 193 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 ESRRGP62508 458 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 ROM1Q03395 351 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 PTGES3Q15185 160 aaKnown RBP13.96□□□□□ -0.17
TRIM39-209ENST00000428728 SMIM21Q3B7S5 101 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 ZNF684Q5T5D7 378 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 ASPHD2Q6ICH7 369 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 FAHD1Q6P587 224 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 PLEKHG7Q6ZR37 379 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 BATF2Q8N1L9 274 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 RBM4BQ9BQ04 359 aaKnown RBP13.96□□□□□ -0.17
TRIM39-209ENST00000428728 MMP27Q9H306 513 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 GPR173Q9NS66 373 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 C19orf12Q9NSK7 152 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 ENPP5Q9UJA9 477 aa13.96□□□□□ -0.17
TRIM39-209ENST00000428728 TRBV23-1A0A0A0MS06 115 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 ANKRD61A6NGH8 418 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 SYNGR1O43759 233 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 ZNF254O75437 659 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 TSPAN15O95858 294 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 NRASP01111 189 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 CXCR4P61073 352 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 EGR3Q06889 387 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 ACSM1Q08AH1 577 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 BCL2L15Q5TBC7 163 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 ZBTB37Q5TC79 503 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 HCP5Q6MZN7 132 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 ZNF322Q6U7Q0 402 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-209ENST00000428728 ACP7Q6ZNF0 438 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 C1orf122Q6ZSJ8 110 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 SLC35F2Q8IXU6 374 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 POC1AQ8NBT0 407 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 OR5R1Q8NH85 324 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 C17orf50Q8WW18 174 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 SLC7A6OSQ96CW6 309 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-209ENST00000428728 NRBF2Q96F24 287 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 APOL4Q9BPW4 351 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms