RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SLC25A26Q70HW3 274 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 KRT74Q7RTS7 529 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 WDR86Q86TI4 376 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 NR2C2APQ86WQ0 139 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 ANGPTL5Q86XS5 388 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 CROCCP3Q8IVE0 287 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF295-AS1Q8N0V1 137 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZCCHC24Q8N2G6 241 aaKnown RBP6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR6M1Q8NGM8 313 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF671Q8TAW3 534 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 ITLN1Q8WWA0 313 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 SLC25A46Q96AG3 418 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 FOXRED1Q96CU9 486 aaPredicted RBP6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 MEGF10Q96KG7 1140 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 SORCS2Q96PQ0 1159 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR2V2Q96R30 315 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 S100A13Q99584 98 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 GFI1Q99684 422 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 CCL19Q99731 98 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 UQCC2Q9BRT2 126 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 TRAF4Q9BUZ4 470 aaPredicted RBP6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 CACNG6Q9BXT2 260 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 EGLN1Q9GZT9 426 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 CNTD2Q9H8S5 307 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 PLEKHF2Q9H8W4 249 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 SAP30LQ9HAJ7 183 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 ELL3Q9HB65 397 aaPredicted RBP6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 UFSP2Q9NUQ7 469 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 FBXO9Q9UK97 447 aaPredicted RBP6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 MRPS28Q9Y2Q9 187 aaKnown RBP6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 PMF1-BGLAPU3KQ54 211 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 V9GY05 133 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 PRR14LQ5THK1 2151 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 UTP20O75691 2785 aaKnown RBP6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 A0A0G2JK05 382 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 TRIM64BA6NI03 449 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 J3QT63 122 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 AIPO00170 330 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 SLC17A2O00624 439 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 CDIPTO14735 213 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 SPRY1O43609 319 aaPredicted RBP6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 ANGPTL7O43827 346 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 CD8AP01732 235 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 CD55P08174 381 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 ADH4P08319 380 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 DANCRP0C864 163 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 SLC2A2P11168 524 aaPredicted RBP6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 ZNF182P17025 639 aaPredicted RBP6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 TNFRSF1AP19438 455 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 HTR2CP28335 458 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 CD200P41217 278 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 PTGFRP43088 359 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 RORCP51449 518 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 CLDN12P56749 244 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 GMFBP60983 142 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 ZNF154Q13106 437 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 MAB21L1Q13394 359 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 FAM209AQ5JX71 171 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 C11orf71Q6IPW1 123 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 RNF144BQ7Z419 303 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 MOGAT3Q86VF5 341 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 CALHM1Q8IU99 346 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 CDH26Q8IXH8 852 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 AP3S1Q92572 193 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 RAB1BQ9H0U4 201 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR51I2Q9H344 312 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 FN3KRPQ9HA64 309 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 C1orf123Q9NWV4 160 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 CCDC59Q9P031 241 aaKnown RBP6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 POLDIP2Q9Y2S7 368 aa6.71□□□□□ -1.34
HMGA1P4-201ENST00000428643 CADP27708 2225 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 A0A0B4J203 849 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 LOC100289279A0A1B0GTE1 492 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 LRRC30A6NM36 301 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 TRAPPC2LH3BP13 241 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 H7C417 338 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 SYNGR1O43759 233 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 CDC14BO60729 498 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 IRF2P14316 349 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 SNRPBP14678 240 aaKnown RBP6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 CDKN1AP38936 164 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 ZP1P60852 638 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 PDZK1IP1Q13113 114 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 RIN1Q13671 783 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 RSU1Q15404 277 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 MPPED2Q15777 294 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 DGUOKQ16854 277 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 CNPY1Q3B7I2 92 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 SLC22A6Q4U2R8 563 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 SPRNQ5BIV9 151 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 C1orf100Q5SVJ3 147 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 GLIPR1L1Q6UWM5 242 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 ZNF826PQ6ZT77 177 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 BATF2Q8N1L9 274 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 CELF2-AS1Q8N7Q2 184 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 BOLLQ8N9W6 283 aaKnown RBP6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 SCCPDHQ8NBX0 429 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR4D6Q8NGJ1 314 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR11L1Q8NGX0 322 aa6.7□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR51F2Q8NH61 342 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms